Protein–RNA interactions for Protein: Q9H6A9

PCNX3, Pecanex-like protein 3, humanhuman

Predictions only

Length 2,034 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX3Q9H6A9 PNMA6B-201ENST00000538162 1200 ntBASIC18.33■□□□□ 0.52
PCNX3Q9H6A9 TBCB-214ENST00000629269 413 ntTSL 5 BASIC18.33■□□□□ 0.52
PCNX3Q9H6A9 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
PCNX3Q9H6A9 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
PCNX3Q9H6A9 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC18.33■□□□□ 0.52
PCNX3Q9H6A9 AC020907.5-201ENST00000624372 1936 ntBASIC18.32■□□□□ 0.52
PCNX3Q9H6A9 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
PCNX3Q9H6A9 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PCNX3Q9H6A9 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC18.32■□□□□ 0.52
PCNX3Q9H6A9 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC18.32■□□□□ 0.52
PCNX3Q9H6A9 AC060766.5-201ENST00000590539 871 ntBASIC18.32■□□□□ 0.52
PCNX3Q9H6A9 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC18.32■□□□□ 0.52
PCNX3Q9H6A9 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
PCNX3Q9H6A9 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
PCNX3Q9H6A9 USP39-204ENST00000409766 2033 ntTSL 2 BASIC18.32■□□□□ 0.52
PCNX3Q9H6A9 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
PCNX3Q9H6A9 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC18.32■□□□□ 0.52
PCNX3Q9H6A9 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
PCNX3Q9H6A9 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC18.32■□□□□ 0.52
PCNX3Q9H6A9 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC18.32■□□□□ 0.52
PCNX3Q9H6A9 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
PCNX3Q9H6A9 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
PCNX3Q9H6A9 NME6-213ENST00000451657 871 ntTSL 2 BASIC18.32■□□□□ 0.52
PCNX3Q9H6A9 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC18.32■□□□□ 0.52
PCNX3Q9H6A9 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC18.32■□□□□ 0.52
PCNX3Q9H6A9 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
PCNX3Q9H6A9 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
PCNX3Q9H6A9 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
PCNX3Q9H6A9 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
PCNX3Q9H6A9 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
PCNX3Q9H6A9 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC18.31■□□□□ 0.52
PCNX3Q9H6A9 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC18.31■□□□□ 0.52
PCNX3Q9H6A9 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC18.31■□□□□ 0.52
PCNX3Q9H6A9 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PCNX3Q9H6A9 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC18.31■□□□□ 0.52
PCNX3Q9H6A9 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PCNX3Q9H6A9 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC18.31■□□□□ 0.52
PCNX3Q9H6A9 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PCNX3Q9H6A9 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PCNX3Q9H6A9 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PCNX3Q9H6A9 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PCNX3Q9H6A9 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
PCNX3Q9H6A9 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
PCNX3Q9H6A9 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PCNX3Q9H6A9 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
PCNX3Q9H6A9 AC099778.1-201ENST00000568593 1911 ntBASIC18.31■□□□□ 0.52
PCNX3Q9H6A9 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC18.31■□□□□ 0.52
PCNX3Q9H6A9 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC18.31■□□□□ 0.52
PCNX3Q9H6A9 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
PCNX3Q9H6A9 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC18.3■□□□□ 0.52
PCNX3Q9H6A9 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC18.3■□□□□ 0.52
PCNX3Q9H6A9 DPP3P2-201ENST00000416030 1696 ntBASIC18.3■□□□□ 0.52
PCNX3Q9H6A9 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC18.3■□□□□ 0.52
PCNX3Q9H6A9 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC18.3■□□□□ 0.52
PCNX3Q9H6A9 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC18.3■□□□□ 0.52
PCNX3Q9H6A9 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
PCNX3Q9H6A9 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC18.3■□□□□ 0.52
PCNX3Q9H6A9 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
PCNX3Q9H6A9 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PCNX3Q9H6A9 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC18.3■□□□□ 0.52
PCNX3Q9H6A9 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC18.3■□□□□ 0.52
PCNX3Q9H6A9 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
PCNX3Q9H6A9 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
PCNX3Q9H6A9 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PCNX3Q9H6A9 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PCNX3Q9H6A9 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PCNX3Q9H6A9 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC18.3■□□□□ 0.52
PCNX3Q9H6A9 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PCNX3Q9H6A9 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
PCNX3Q9H6A9 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
PCNX3Q9H6A9 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PCNX3Q9H6A9 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC18.29■□□□□ 0.52
PCNX3Q9H6A9 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC18.29■□□□□ 0.52
PCNX3Q9H6A9 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC18.29■□□□□ 0.52
PCNX3Q9H6A9 AC073130.3-201ENST00000624389 2278 ntBASIC18.29■□□□□ 0.52
PCNX3Q9H6A9 NXN-202ENST00000537628 1340 ntTSL 3 BASIC18.29■□□□□ 0.52
PCNX3Q9H6A9 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PCNX3Q9H6A9 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
PCNX3Q9H6A9 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PCNX3Q9H6A9 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC18.29■□□□□ 0.52
PCNX3Q9H6A9 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC18.29■□□□□ 0.52
PCNX3Q9H6A9 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
PCNX3Q9H6A9 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC18.29■□□□□ 0.52
PCNX3Q9H6A9 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
PCNX3Q9H6A9 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PCNX3Q9H6A9 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
PCNX3Q9H6A9 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PCNX3Q9H6A9 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC18.28■□□□□ 0.52
PCNX3Q9H6A9 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
PCNX3Q9H6A9 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC18.28■□□□□ 0.52
PCNX3Q9H6A9 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC18.28■□□□□ 0.52
PCNX3Q9H6A9 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC18.28■□□□□ 0.52
PCNX3Q9H6A9 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC18.28■□□□□ 0.52
PCNX3Q9H6A9 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC18.28■□□□□ 0.52
PCNX3Q9H6A9 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC18.28■□□□□ 0.52
PCNX3Q9H6A9 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC18.28■□□□□ 0.52
PCNX3Q9H6A9 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PCNX3Q9H6A9 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC18.28■□□□□ 0.52
PCNX3Q9H6A9 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
PCNX3Q9H6A9 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms