Protein–RNA interactions for Protein: Q9H444

CHMP4B, Charged multivesicular body protein 4b, humanhuman

Known RBP Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4BQ9H444 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC25.45■■□□□ 1.66
CHMP4BQ9H444 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC25.45■■□□□ 1.66
CHMP4BQ9H444 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC25.44■■□□□ 1.66
CHMP4BQ9H444 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC25.44■■□□□ 1.66
CHMP4BQ9H444 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC25.44■■□□□ 1.66
CHMP4BQ9H444 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
CHMP4BQ9H444 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
CHMP4BQ9H444 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
CHMP4BQ9H444 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC25.44■■□□□ 1.66
CHMP4BQ9H444 HES2-205ENST00000487437 968 ntTSL 3 BASIC25.44■■□□□ 1.66
CHMP4BQ9H444 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC25.44■■□□□ 1.66
CHMP4BQ9H444 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC25.44■■□□□ 1.66
CHMP4BQ9H444 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
CHMP4BQ9H444 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC25.44■■□□□ 1.66
CHMP4BQ9H444 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
CHMP4BQ9H444 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
CHMP4BQ9H444 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC25.44■■□□□ 1.66
CHMP4BQ9H444 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC25.44■■□□□ 1.66
CHMP4BQ9H444 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
CHMP4BQ9H444 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC25.43■■□□□ 1.66
CHMP4BQ9H444 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
CHMP4BQ9H444 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
CHMP4BQ9H444 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC25.43■■□□□ 1.66
CHMP4BQ9H444 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC25.43■■□□□ 1.66
CHMP4BQ9H444 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC25.43■■□□□ 1.66
CHMP4BQ9H444 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC25.43■■□□□ 1.66
CHMP4BQ9H444 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC25.43■■□□□ 1.66
CHMP4BQ9H444 AC026185.1-201ENST00000445748 174 ntBASIC25.43■■□□□ 1.66
CHMP4BQ9H444 VPS53-216ENST00000574029 585 ntTSL 4 BASIC25.43■■□□□ 1.66
CHMP4BQ9H444 BRWD1-AS2-201ENST00000603064 1028 ntBASIC25.43■■□□□ 1.66
CHMP4BQ9H444 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
CHMP4BQ9H444 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC25.43■■□□□ 1.66
CHMP4BQ9H444 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC25.43■■□□□ 1.66
CHMP4BQ9H444 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC25.42■■□□□ 1.66
CHMP4BQ9H444 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC25.42■■□□□ 1.66
CHMP4BQ9H444 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC25.42■■□□□ 1.66
CHMP4BQ9H444 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC25.42■■□□□ 1.66
CHMP4BQ9H444 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
CHMP4BQ9H444 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
CHMP4BQ9H444 IKBKGP1-201ENST00000612193 1073 ntBASIC25.42■■□□□ 1.66
CHMP4BQ9H444 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC25.42■■□□□ 1.66
CHMP4BQ9H444 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC25.42■■□□□ 1.66
CHMP4BQ9H444 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
CHMP4BQ9H444 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
CHMP4BQ9H444 CD37-204ENST00000535669 1674 ntTSL 2 BASIC25.42■■□□□ 1.66
CHMP4BQ9H444 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC25.41■■□□□ 1.66
CHMP4BQ9H444 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC25.41■■□□□ 1.66
CHMP4BQ9H444 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC25.41■■□□□ 1.66
CHMP4BQ9H444 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
CHMP4BQ9H444 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
CHMP4BQ9H444 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC25.41■■□□□ 1.66
CHMP4BQ9H444 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
CHMP4BQ9H444 CDCA4P2-201ENST00000441182 718 ntBASIC25.41■■□□□ 1.66
CHMP4BQ9H444 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC25.41■■□□□ 1.66
CHMP4BQ9H444 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
CHMP4BQ9H444 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
CHMP4BQ9H444 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
CHMP4BQ9H444 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC25.41■■□□□ 1.66
CHMP4BQ9H444 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
CHMP4BQ9H444 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC25.4■■□□□ 1.66
CHMP4BQ9H444 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC25.4■■□□□ 1.66
CHMP4BQ9H444 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC25.4■■□□□ 1.66
CHMP4BQ9H444 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC25.4■■□□□ 1.66
CHMP4BQ9H444 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC25.4■■□□□ 1.66
CHMP4BQ9H444 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
CHMP4BQ9H444 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
CHMP4BQ9H444 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
CHMP4BQ9H444 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC25.4■■□□□ 1.66
CHMP4BQ9H444 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC25.39■■□□□ 1.66
CHMP4BQ9H444 NXN-202ENST00000537628 1340 ntTSL 3 BASIC25.39■■□□□ 1.66
CHMP4BQ9H444 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC25.39■■□□□ 1.66
CHMP4BQ9H444 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC25.39■■□□□ 1.66
CHMP4BQ9H444 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
CHMP4BQ9H444 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC25.39■■□□□ 1.66
CHMP4BQ9H444 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
CHMP4BQ9H444 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC25.39■■□□□ 1.66
CHMP4BQ9H444 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC25.39■■□□□ 1.66
CHMP4BQ9H444 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC25.39■■□□□ 1.66
CHMP4BQ9H444 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC25.39■■□□□ 1.66
CHMP4BQ9H444 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC25.39■■□□□ 1.65
CHMP4BQ9H444 BX119927.1-201ENST00000636596 1552 ntBASIC25.39■■□□□ 1.65
CHMP4BQ9H444 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC25.39■■□□□ 1.65
CHMP4BQ9H444 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC25.39■■□□□ 1.65
CHMP4BQ9H444 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.65
CHMP4BQ9H444 H19-201ENST00000411754 1788 ntTSL 5 BASIC25.39■■□□□ 1.65
CHMP4BQ9H444 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
CHMP4BQ9H444 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
CHMP4BQ9H444 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC25.38■■□□□ 1.65
CHMP4BQ9H444 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC25.38■■□□□ 1.65
CHMP4BQ9H444 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC25.38■■□□□ 1.65
CHMP4BQ9H444 ISCU-212ENST00000547005 795 ntTSL 3 BASIC25.38■■□□□ 1.65
CHMP4BQ9H444 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC25.38■■□□□ 1.65
CHMP4BQ9H444 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC25.38■■□□□ 1.65
CHMP4BQ9H444 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC25.38■■□□□ 1.65
CHMP4BQ9H444 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC25.38■■□□□ 1.65
CHMP4BQ9H444 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
CHMP4BQ9H444 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
CHMP4BQ9H444 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC25.37■■□□□ 1.65
CHMP4BQ9H444 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
CHMP4BQ9H444 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC25.37■■□□□ 1.65
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms