Protein–RNA interactions for Protein: Q9H270

VPS11, Vacuolar protein sorting-associated protein 11 homolog, humanhuman

Predictions only

Length 941 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11Q9H270 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
VPS11Q9H270 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
VPS11Q9H270 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
VPS11Q9H270 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC20.24■□□□□ 0.83
VPS11Q9H270 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
VPS11Q9H270 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
VPS11Q9H270 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
VPS11Q9H270 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
VPS11Q9H270 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC20.24■□□□□ 0.83
VPS11Q9H270 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
VPS11Q9H270 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC20.24■□□□□ 0.83
VPS11Q9H270 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
VPS11Q9H270 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
VPS11Q9H270 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
VPS11Q9H270 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC20.24■□□□□ 0.83
VPS11Q9H270 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC20.23■□□□□ 0.83
VPS11Q9H270 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
VPS11Q9H270 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
VPS11Q9H270 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
VPS11Q9H270 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC20.23■□□□□ 0.83
VPS11Q9H270 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC20.23■□□□□ 0.83
VPS11Q9H270 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
VPS11Q9H270 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC20.23■□□□□ 0.83
VPS11Q9H270 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
VPS11Q9H270 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
VPS11Q9H270 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC20.23■□□□□ 0.83
VPS11Q9H270 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
VPS11Q9H270 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC20.23■□□□□ 0.83
VPS11Q9H270 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC20.23■□□□□ 0.83
VPS11Q9H270 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC20.23■□□□□ 0.83
VPS11Q9H270 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
VPS11Q9H270 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
VPS11Q9H270 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
VPS11Q9H270 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC20.23■□□□□ 0.83
VPS11Q9H270 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
VPS11Q9H270 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
VPS11Q9H270 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
VPS11Q9H270 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
VPS11Q9H270 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
VPS11Q9H270 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
VPS11Q9H270 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
VPS11Q9H270 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
VPS11Q9H270 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
VPS11Q9H270 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
VPS11Q9H270 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
VPS11Q9H270 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
VPS11Q9H270 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
VPS11Q9H270 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
VPS11Q9H270 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
VPS11Q9H270 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
VPS11Q9H270 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC20.22■□□□□ 0.83
VPS11Q9H270 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
VPS11Q9H270 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC20.22■□□□□ 0.83
VPS11Q9H270 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
VPS11Q9H270 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
VPS11Q9H270 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC20.22■□□□□ 0.83
VPS11Q9H270 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
VPS11Q9H270 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC20.22■□□□□ 0.83
VPS11Q9H270 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC20.21■□□□□ 0.83
VPS11Q9H270 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
VPS11Q9H270 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
VPS11Q9H270 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
VPS11Q9H270 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC20.21■□□□□ 0.83
VPS11Q9H270 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC20.21■□□□□ 0.83
VPS11Q9H270 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
VPS11Q9H270 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC20.21■□□□□ 0.83
VPS11Q9H270 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
VPS11Q9H270 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
VPS11Q9H270 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC20.21■□□□□ 0.83
VPS11Q9H270 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC20.21■□□□□ 0.83
VPS11Q9H270 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
VPS11Q9H270 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
VPS11Q9H270 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
VPS11Q9H270 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
VPS11Q9H270 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
VPS11Q9H270 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
VPS11Q9H270 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC20.21■□□□□ 0.83
VPS11Q9H270 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC20.21■□□□□ 0.83
VPS11Q9H270 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
VPS11Q9H270 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC20.2■□□□□ 0.82
VPS11Q9H270 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
VPS11Q9H270 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
VPS11Q9H270 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
VPS11Q9H270 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
VPS11Q9H270 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
VPS11Q9H270 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC20.2■□□□□ 0.82
VPS11Q9H270 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC20.2■□□□□ 0.82
VPS11Q9H270 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC20.2■□□□□ 0.82
VPS11Q9H270 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC20.2■□□□□ 0.82
VPS11Q9H270 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
VPS11Q9H270 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC20.2■□□□□ 0.82
VPS11Q9H270 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
VPS11Q9H270 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
VPS11Q9H270 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
VPS11Q9H270 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
VPS11Q9H270 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
VPS11Q9H270 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
VPS11Q9H270 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
VPS11Q9H270 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
VPS11Q9H270 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms