Protein–RNA interactions for Protein: Q9H251

CDH23, Cadherin-23, humanhuman

Predictions only

Length 3,354 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH23Q9H251 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CDH23Q9H251 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CDH23Q9H251 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
CDH23Q9H251 TSPY14P-201ENST00000303979 915 ntBASIC21.61■■□□□ 1.05
CDH23Q9H251 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CDH23Q9H251 STX5-203ENST00000394690 1568 ntTSL 5 BASIC21.61■■□□□ 1.05
CDH23Q9H251 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
CDH23Q9H251 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
CDH23Q9H251 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC21.6■■□□□ 1.05
CDH23Q9H251 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
CDH23Q9H251 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CDH23Q9H251 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
CDH23Q9H251 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC21.6■■□□□ 1.05
CDH23Q9H251 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC21.6■■□□□ 1.05
CDH23Q9H251 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC21.6■■□□□ 1.05
CDH23Q9H251 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
CDH23Q9H251 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CDH23Q9H251 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CDH23Q9H251 COPE-203ENST00000351079 907 ntTSL 2 BASIC21.6■■□□□ 1.05
CDH23Q9H251 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CDH23Q9H251 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC21.59■■□□□ 1.05
CDH23Q9H251 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
CDH23Q9H251 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC21.59■■□□□ 1.05
CDH23Q9H251 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CDH23Q9H251 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
CDH23Q9H251 PVRIG2P-201ENST00000435460 978 ntBASIC21.59■■□□□ 1.05
CDH23Q9H251 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC21.59■■□□□ 1.05
CDH23Q9H251 EXOC3-AS1-202ENST00000623673 1663 ntBASIC21.59■■□□□ 1.05
CDH23Q9H251 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC21.59■■□□□ 1.05
CDH23Q9H251 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC21.59■■□□□ 1.05
CDH23Q9H251 TREX2-204ENST00000370212 861 ntTSL 5 BASIC21.59■■□□□ 1.05
CDH23Q9H251 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC21.59■■□□□ 1.05
CDH23Q9H251 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC21.59■■□□□ 1.05
CDH23Q9H251 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC21.59■■□□□ 1.05
CDH23Q9H251 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
CDH23Q9H251 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC21.59■■□□□ 1.05
CDH23Q9H251 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC21.59■■□□□ 1.05
CDH23Q9H251 AP000347.1-202ENST00000435868 847 ntBASIC21.59■■□□□ 1.05
CDH23Q9H251 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC21.58■■□□□ 1.05
CDH23Q9H251 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
CDH23Q9H251 AC117947.1-201ENST00000427448 529 ntBASIC21.58■■□□□ 1.05
CDH23Q9H251 F2R-202ENST00000505600 442 ntTSL 2 BASIC21.58■■□□□ 1.05
CDH23Q9H251 AC004263.2-201ENST00000617183 678 ntBASIC21.58■■□□□ 1.05
CDH23Q9H251 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC21.58■■□□□ 1.05
CDH23Q9H251 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC21.58■■□□□ 1.05
CDH23Q9H251 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC21.58■■□□□ 1.05
CDH23Q9H251 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
CDH23Q9H251 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
CDH23Q9H251 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
CDH23Q9H251 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
CDH23Q9H251 NIFKP9-201ENST00000419265 221 ntBASIC21.58■■□□□ 1.04
CDH23Q9H251 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC21.58■■□□□ 1.04
CDH23Q9H251 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC21.58■■□□□ 1.04
CDH23Q9H251 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
CDH23Q9H251 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC21.58■■□□□ 1.04
CDH23Q9H251 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC21.58■■□□□ 1.04
CDH23Q9H251 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
CDH23Q9H251 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
CDH23Q9H251 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
CDH23Q9H251 MESTP1-201ENST00000404287 994 ntBASIC21.57■■□□□ 1.04
CDH23Q9H251 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC21.57■■□□□ 1.04
CDH23Q9H251 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC21.57■■□□□ 1.04
CDH23Q9H251 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
CDH23Q9H251 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC21.57■■□□□ 1.04
CDH23Q9H251 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC21.57■■□□□ 1.04
CDH23Q9H251 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC21.57■■□□□ 1.04
CDH23Q9H251 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC21.57■■□□□ 1.04
CDH23Q9H251 IPPK-202ENST00000375522 882 ntTSL 3 BASIC21.57■■□□□ 1.04
CDH23Q9H251 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
CDH23Q9H251 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC21.57■■□□□ 1.04
CDH23Q9H251 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC21.57■■□□□ 1.04
CDH23Q9H251 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
CDH23Q9H251 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC21.57■■□□□ 1.04
CDH23Q9H251 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC21.57■■□□□ 1.04
CDH23Q9H251 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC21.57■■□□□ 1.04
CDH23Q9H251 KRT16P1-201ENST00000399124 1418 ntBASIC21.57■■□□□ 1.04
CDH23Q9H251 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC21.56■■□□□ 1.04
CDH23Q9H251 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC21.56■■□□□ 1.04
CDH23Q9H251 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC21.56■■□□□ 1.04
CDH23Q9H251 CLN6-214ENST00000636314 442 ntTSL 3 BASIC21.56■■□□□ 1.04
CDH23Q9H251 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CDH23Q9H251 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
CDH23Q9H251 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC21.56■■□□□ 1.04
CDH23Q9H251 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
CDH23Q9H251 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
CDH23Q9H251 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC21.56■■□□□ 1.04
CDH23Q9H251 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC21.56■■□□□ 1.04
CDH23Q9H251 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC21.56■■□□□ 1.04
CDH23Q9H251 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC21.56■■□□□ 1.04
CDH23Q9H251 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
CDH23Q9H251 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC21.56■■□□□ 1.04
CDH23Q9H251 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
CDH23Q9H251 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC21.56■■□□□ 1.04
CDH23Q9H251 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CDH23Q9H251 AC023511.2-201ENST00000618803 211 ntBASIC21.56■■□□□ 1.04
CDH23Q9H251 AC093458.2-201ENST00000623150 629 ntBASIC21.56■■□□□ 1.04
CDH23Q9H251 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
CDH23Q9H251 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CDH23Q9H251 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
CDH23Q9H251 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms