Protein–RNA interactions for Protein: Q9C0C7

AMBRA1, Activating molecule in BECN1-regulated autophagy protein 1, humanhuman

Predictions only

Length 1,298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1Q9C0C7 AC004408.2-201ENST00000623613 2777 ntBASIC18.83■□□□□ 0.61
AMBRA1Q9C0C7 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.61
AMBRA1Q9C0C7 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
AMBRA1Q9C0C7 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
AMBRA1Q9C0C7 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
AMBRA1Q9C0C7 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
AMBRA1Q9C0C7 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC18.83■□□□□ 0.6
AMBRA1Q9C0C7 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC18.83■□□□□ 0.6
AMBRA1Q9C0C7 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
AMBRA1Q9C0C7 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC18.83■□□□□ 0.6
AMBRA1Q9C0C7 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC18.83■□□□□ 0.6
AMBRA1Q9C0C7 AC010141.2-201ENST00000452426 721 ntBASIC18.83■□□□□ 0.6
AMBRA1Q9C0C7 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
AMBRA1Q9C0C7 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC18.83■□□□□ 0.6
AMBRA1Q9C0C7 AC120498.10-201ENST00000621827 505 ntBASIC18.83■□□□□ 0.6
AMBRA1Q9C0C7 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC18.83■□□□□ 0.6
AMBRA1Q9C0C7 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC18.83■□□□□ 0.6
AMBRA1Q9C0C7 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.6
AMBRA1Q9C0C7 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
AMBRA1Q9C0C7 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
AMBRA1Q9C0C7 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
AMBRA1Q9C0C7 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC18.82■□□□□ 0.6
AMBRA1Q9C0C7 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC18.82■□□□□ 0.6
AMBRA1Q9C0C7 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
AMBRA1Q9C0C7 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
AMBRA1Q9C0C7 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
AMBRA1Q9C0C7 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
AMBRA1Q9C0C7 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
AMBRA1Q9C0C7 KRT18P5-201ENST00000436075 1291 ntBASIC18.82■□□□□ 0.6
AMBRA1Q9C0C7 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
AMBRA1Q9C0C7 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC18.82■□□□□ 0.6
AMBRA1Q9C0C7 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC18.82■□□□□ 0.6
AMBRA1Q9C0C7 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
AMBRA1Q9C0C7 SLC7A5P2-201ENST00000553010 536 ntBASIC18.82■□□□□ 0.6
AMBRA1Q9C0C7 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC18.82■□□□□ 0.6
AMBRA1Q9C0C7 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC18.82■□□□□ 0.6
AMBRA1Q9C0C7 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
AMBRA1Q9C0C7 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
AMBRA1Q9C0C7 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
AMBRA1Q9C0C7 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
AMBRA1Q9C0C7 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
AMBRA1Q9C0C7 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
AMBRA1Q9C0C7 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
AMBRA1Q9C0C7 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC18.81■□□□□ 0.6
AMBRA1Q9C0C7 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
AMBRA1Q9C0C7 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
AMBRA1Q9C0C7 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
AMBRA1Q9C0C7 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
AMBRA1Q9C0C7 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
AMBRA1Q9C0C7 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
AMBRA1Q9C0C7 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
AMBRA1Q9C0C7 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
AMBRA1Q9C0C7 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
AMBRA1Q9C0C7 PTPA-214ENST00000423100 988 ntTSL 2 BASIC18.81■□□□□ 0.6
AMBRA1Q9C0C7 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC18.81■□□□□ 0.6
AMBRA1Q9C0C7 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
AMBRA1Q9C0C7 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
AMBRA1Q9C0C7 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC18.81■□□□□ 0.6
AMBRA1Q9C0C7 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
AMBRA1Q9C0C7 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
AMBRA1Q9C0C7 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
AMBRA1Q9C0C7 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC18.81■□□□□ 0.6
AMBRA1Q9C0C7 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
AMBRA1Q9C0C7 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
AMBRA1Q9C0C7 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
AMBRA1Q9C0C7 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC18.8■□□□□ 0.6
AMBRA1Q9C0C7 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
AMBRA1Q9C0C7 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
AMBRA1Q9C0C7 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC18.8■□□□□ 0.6
AMBRA1Q9C0C7 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC18.8■□□□□ 0.6
AMBRA1Q9C0C7 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC18.8■□□□□ 0.6
AMBRA1Q9C0C7 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
AMBRA1Q9C0C7 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
AMBRA1Q9C0C7 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC18.8■□□□□ 0.6
AMBRA1Q9C0C7 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC18.8■□□□□ 0.6
AMBRA1Q9C0C7 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
AMBRA1Q9C0C7 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
AMBRA1Q9C0C7 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
AMBRA1Q9C0C7 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
AMBRA1Q9C0C7 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC18.8■□□□□ 0.6
AMBRA1Q9C0C7 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
AMBRA1Q9C0C7 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
AMBRA1Q9C0C7 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC18.8■□□□□ 0.6
AMBRA1Q9C0C7 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC18.8■□□□□ 0.6
AMBRA1Q9C0C7 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
AMBRA1Q9C0C7 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
AMBRA1Q9C0C7 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC18.79■□□□□ 0.6
AMBRA1Q9C0C7 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
AMBRA1Q9C0C7 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC18.79■□□□□ 0.6
AMBRA1Q9C0C7 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC18.79■□□□□ 0.6
AMBRA1Q9C0C7 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
AMBRA1Q9C0C7 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC18.79■□□□□ 0.6
AMBRA1Q9C0C7 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
AMBRA1Q9C0C7 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC18.79■□□□□ 0.6
AMBRA1Q9C0C7 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC18.79■□□□□ 0.6
AMBRA1Q9C0C7 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
AMBRA1Q9C0C7 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC18.79■□□□□ 0.6
AMBRA1Q9C0C7 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC18.79■□□□□ 0.6
AMBRA1Q9C0C7 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC18.79■□□□□ 0.6
AMBRA1Q9C0C7 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms