Protein–RNA interactions for Protein: Q9BYD9

ACTRT3, Actin-related protein T3, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTRT3Q9BYD9 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
ACTRT3Q9BYD9 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
ACTRT3Q9BYD9 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC18.8■□□□□ 0.6
ACTRT3Q9BYD9 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
ACTRT3Q9BYD9 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC18.8■□□□□ 0.6
ACTRT3Q9BYD9 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
ACTRT3Q9BYD9 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
ACTRT3Q9BYD9 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
ACTRT3Q9BYD9 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC18.8■□□□□ 0.6
ACTRT3Q9BYD9 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
ACTRT3Q9BYD9 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
ACTRT3Q9BYD9 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
ACTRT3Q9BYD9 KRT18P68-201ENST00000392293 1000 ntBASIC18.8■□□□□ 0.6
ACTRT3Q9BYD9 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC18.8■□□□□ 0.6
ACTRT3Q9BYD9 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC18.8■□□□□ 0.6
ACTRT3Q9BYD9 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC18.8■□□□□ 0.6
ACTRT3Q9BYD9 AC092437.1-201ENST00000624794 1048 ntBASIC18.8■□□□□ 0.6
ACTRT3Q9BYD9 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC18.8■□□□□ 0.6
ACTRT3Q9BYD9 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC18.8■□□□□ 0.6
ACTRT3Q9BYD9 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC18.8■□□□□ 0.6
ACTRT3Q9BYD9 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
ACTRT3Q9BYD9 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
ACTRT3Q9BYD9 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
ACTRT3Q9BYD9 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC18.8■□□□□ 0.6
ACTRT3Q9BYD9 GCK-205ENST00000437084 1385 ntTSL 5 BASIC18.8■□□□□ 0.6
ACTRT3Q9BYD9 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
ACTRT3Q9BYD9 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC18.79■□□□□ 0.6
ACTRT3Q9BYD9 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
ACTRT3Q9BYD9 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC18.79■□□□□ 0.6
ACTRT3Q9BYD9 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC18.79■□□□□ 0.6
ACTRT3Q9BYD9 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
ACTRT3Q9BYD9 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC18.79■□□□□ 0.6
ACTRT3Q9BYD9 AC004911.1-201ENST00000416316 871 ntBASIC18.79■□□□□ 0.6
ACTRT3Q9BYD9 GLI3-203ENST00000437480 451 ntTSL 2 BASIC18.79■□□□□ 0.6
ACTRT3Q9BYD9 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC18.79■□□□□ 0.6
ACTRT3Q9BYD9 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC18.79■□□□□ 0.6
ACTRT3Q9BYD9 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
ACTRT3Q9BYD9 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC18.79■□□□□ 0.6
ACTRT3Q9BYD9 CYP2T3P-201ENST00000601990 817 ntBASIC18.79■□□□□ 0.6
ACTRT3Q9BYD9 AC005181.1-201ENST00000604782 1256 ntBASIC18.79■□□□□ 0.6
ACTRT3Q9BYD9 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
ACTRT3Q9BYD9 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC18.79■□□□□ 0.6
ACTRT3Q9BYD9 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
ACTRT3Q9BYD9 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC18.79■□□□□ 0.6
ACTRT3Q9BYD9 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
ACTRT3Q9BYD9 ME2-218ENST00000640965 2476 ntTSL 5 BASIC18.79■□□□□ 0.6
ACTRT3Q9BYD9 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ACTRT3Q9BYD9 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC18.79■□□□□ 0.6
ACTRT3Q9BYD9 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
ACTRT3Q9BYD9 TCF3P1-201ENST00000423021 1937 ntBASIC18.78■□□□□ 0.6
ACTRT3Q9BYD9 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
ACTRT3Q9BYD9 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
ACTRT3Q9BYD9 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
ACTRT3Q9BYD9 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
ACTRT3Q9BYD9 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC18.78■□□□□ 0.6
ACTRT3Q9BYD9 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC18.78■□□□□ 0.6
ACTRT3Q9BYD9 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC18.78■□□□□ 0.6
ACTRT3Q9BYD9 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC18.78■□□□□ 0.6
ACTRT3Q9BYD9 AC080038.1-201ENST00000611274 1154 ntBASIC18.78■□□□□ 0.6
ACTRT3Q9BYD9 IKBKGP1-201ENST00000612193 1073 ntBASIC18.78■□□□□ 0.6
ACTRT3Q9BYD9 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC18.78■□□□□ 0.6
ACTRT3Q9BYD9 AC105020.6-201ENST00000621523 1217 ntBASIC18.78■□□□□ 0.6
ACTRT3Q9BYD9 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC18.78■□□□□ 0.6
ACTRT3Q9BYD9 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
ACTRT3Q9BYD9 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
ACTRT3Q9BYD9 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
ACTRT3Q9BYD9 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
ACTRT3Q9BYD9 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
ACTRT3Q9BYD9 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
ACTRT3Q9BYD9 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
ACTRT3Q9BYD9 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC18.78■□□□□ 0.6
ACTRT3Q9BYD9 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
ACTRT3Q9BYD9 H19-201ENST00000411754 1788 ntTSL 5 BASIC18.78■□□□□ 0.6
ACTRT3Q9BYD9 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
ACTRT3Q9BYD9 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
ACTRT3Q9BYD9 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC18.78■□□□□ 0.6
ACTRT3Q9BYD9 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
ACTRT3Q9BYD9 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC18.77■□□□□ 0.6
ACTRT3Q9BYD9 PCDHAC2-203ENST00000615316 3011 ntBASIC18.77■□□□□ 0.6
ACTRT3Q9BYD9 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC18.77■□□□□ 0.6
ACTRT3Q9BYD9 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC18.77■□□□□ 0.6
ACTRT3Q9BYD9 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
ACTRT3Q9BYD9 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC18.77■□□□□ 0.6
ACTRT3Q9BYD9 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
ACTRT3Q9BYD9 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC18.77■□□□□ 0.6
ACTRT3Q9BYD9 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC18.77■□□□□ 0.6
ACTRT3Q9BYD9 AL512625.2-201ENST00000417533 625 ntBASIC18.77■□□□□ 0.6
ACTRT3Q9BYD9 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC18.77■□□□□ 0.6
ACTRT3Q9BYD9 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC18.77■□□□□ 0.6
ACTRT3Q9BYD9 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC18.77■□□□□ 0.6
ACTRT3Q9BYD9 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC18.77■□□□□ 0.6
ACTRT3Q9BYD9 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
ACTRT3Q9BYD9 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
ACTRT3Q9BYD9 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
ACTRT3Q9BYD9 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
ACTRT3Q9BYD9 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC18.77■□□□□ 0.6
ACTRT3Q9BYD9 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
ACTRT3Q9BYD9 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
ACTRT3Q9BYD9 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.59
ACTRT3Q9BYD9 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms