Protein–RNA interactions for Protein: Q9BRZ2

TRIM56, E3 ubiquitin-protein ligase TRIM56, humanhuman

Known RBP Predictions only

Length 755 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56Q9BRZ2 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC20.52■□□□□ 0.88
TRIM56Q9BRZ2 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC20.52■□□□□ 0.88
TRIM56Q9BRZ2 SLC7A5P1-201ENST00000568957 537 ntBASIC20.52■□□□□ 0.88
TRIM56Q9BRZ2 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
TRIM56Q9BRZ2 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC20.52■□□□□ 0.88
TRIM56Q9BRZ2 MYCNOS-205ENST00000641950 531 ntBASIC20.52■□□□□ 0.88
TRIM56Q9BRZ2 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
TRIM56Q9BRZ2 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
TRIM56Q9BRZ2 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
TRIM56Q9BRZ2 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
TRIM56Q9BRZ2 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC20.52■□□□□ 0.88
TRIM56Q9BRZ2 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
TRIM56Q9BRZ2 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC20.52■□□□□ 0.87
TRIM56Q9BRZ2 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
TRIM56Q9BRZ2 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC20.51■□□□□ 0.87
TRIM56Q9BRZ2 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
TRIM56Q9BRZ2 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
TRIM56Q9BRZ2 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC20.51■□□□□ 0.87
TRIM56Q9BRZ2 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
TRIM56Q9BRZ2 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
TRIM56Q9BRZ2 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
TRIM56Q9BRZ2 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
TRIM56Q9BRZ2 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
TRIM56Q9BRZ2 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC20.51■□□□□ 0.87
TRIM56Q9BRZ2 AC007322.3-201ENST00000426526 701 ntBASIC20.51■□□□□ 0.87
TRIM56Q9BRZ2 GLI3-203ENST00000437480 451 ntTSL 2 BASIC20.51■□□□□ 0.87
TRIM56Q9BRZ2 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
TRIM56Q9BRZ2 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
TRIM56Q9BRZ2 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
TRIM56Q9BRZ2 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC20.51■□□□□ 0.87
TRIM56Q9BRZ2 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
TRIM56Q9BRZ2 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC20.51■□□□□ 0.87
TRIM56Q9BRZ2 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
TRIM56Q9BRZ2 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
TRIM56Q9BRZ2 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC20.5■□□□□ 0.87
TRIM56Q9BRZ2 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
TRIM56Q9BRZ2 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC20.5■□□□□ 0.87
TRIM56Q9BRZ2 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC20.5■□□□□ 0.87
TRIM56Q9BRZ2 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
TRIM56Q9BRZ2 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
TRIM56Q9BRZ2 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
TRIM56Q9BRZ2 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC20.5■□□□□ 0.87
TRIM56Q9BRZ2 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC20.5■□□□□ 0.87
TRIM56Q9BRZ2 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC20.5■□□□□ 0.87
TRIM56Q9BRZ2 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
TRIM56Q9BRZ2 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
TRIM56Q9BRZ2 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC20.5■□□□□ 0.87
TRIM56Q9BRZ2 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
TRIM56Q9BRZ2 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
TRIM56Q9BRZ2 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
TRIM56Q9BRZ2 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
TRIM56Q9BRZ2 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
TRIM56Q9BRZ2 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC20.5■□□□□ 0.87
TRIM56Q9BRZ2 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
TRIM56Q9BRZ2 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
TRIM56Q9BRZ2 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
TRIM56Q9BRZ2 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
TRIM56Q9BRZ2 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
TRIM56Q9BRZ2 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
TRIM56Q9BRZ2 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
TRIM56Q9BRZ2 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC20.49■□□□□ 0.87
TRIM56Q9BRZ2 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
TRIM56Q9BRZ2 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
TRIM56Q9BRZ2 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
TRIM56Q9BRZ2 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC20.49■□□□□ 0.87
TRIM56Q9BRZ2 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
TRIM56Q9BRZ2 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC20.49■□□□□ 0.87
TRIM56Q9BRZ2 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC20.49■□□□□ 0.87
TRIM56Q9BRZ2 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC20.49■□□□□ 0.87
TRIM56Q9BRZ2 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC20.49■□□□□ 0.87
TRIM56Q9BRZ2 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
TRIM56Q9BRZ2 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC20.49■□□□□ 0.87
TRIM56Q9BRZ2 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
TRIM56Q9BRZ2 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
TRIM56Q9BRZ2 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC20.48■□□□□ 0.87
TRIM56Q9BRZ2 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC20.48■□□□□ 0.87
TRIM56Q9BRZ2 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
TRIM56Q9BRZ2 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC20.48■□□□□ 0.87
TRIM56Q9BRZ2 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC20.48■□□□□ 0.87
TRIM56Q9BRZ2 KRT8P36-201ENST00000489121 1440 ntBASIC20.48■□□□□ 0.87
TRIM56Q9BRZ2 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
TRIM56Q9BRZ2 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
TRIM56Q9BRZ2 STX7-201ENST00000367937 1090 ntTSL 5 BASIC20.48■□□□□ 0.87
TRIM56Q9BRZ2 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC20.48■□□□□ 0.87
TRIM56Q9BRZ2 CD44-222ENST00000526025 1052 ntTSL 2 BASIC20.48■□□□□ 0.87
TRIM56Q9BRZ2 BRI3-207ENST00000539286 699 ntTSL 2 BASIC20.48■□□□□ 0.87
TRIM56Q9BRZ2 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC20.48■□□□□ 0.87
TRIM56Q9BRZ2 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC20.48■□□□□ 0.87
TRIM56Q9BRZ2 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
TRIM56Q9BRZ2 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
TRIM56Q9BRZ2 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC20.48■□□□□ 0.87
TRIM56Q9BRZ2 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
TRIM56Q9BRZ2 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
TRIM56Q9BRZ2 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
TRIM56Q9BRZ2 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
TRIM56Q9BRZ2 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
TRIM56Q9BRZ2 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC20.48■□□□□ 0.87
TRIM56Q9BRZ2 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
TRIM56Q9BRZ2 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
TRIM56Q9BRZ2 AC125437.2-201ENST00000625180 2167 ntBASIC20.48■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 54.1 ms