Protein–RNA interactions for Protein: Q99958

FOXC2, Forkhead box protein C2, humanhuman

Predictions only

Length 501 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXC2Q99958 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
FOXC2Q99958 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
FOXC2Q99958 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
FOXC2Q99958 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC17.03■□□□□ 0.32
FOXC2Q99958 TREX2-204ENST00000370212 861 ntTSL 5 BASIC17.03■□□□□ 0.32
FOXC2Q99958 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
FOXC2Q99958 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
FOXC2Q99958 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC17.03■□□□□ 0.32
FOXC2Q99958 UPK3BP1-201ENST00000428678 509 ntBASIC17.03■□□□□ 0.32
FOXC2Q99958 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC17.03■□□□□ 0.32
FOXC2Q99958 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC17.03■□□□□ 0.32
FOXC2Q99958 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC17.03■□□□□ 0.32
FOXC2Q99958 F2R-202ENST00000505600 442 ntTSL 2 BASIC17.03■□□□□ 0.32
FOXC2Q99958 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC17.03■□□□□ 0.32
FOXC2Q99958 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC17.03■□□□□ 0.32
FOXC2Q99958 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
FOXC2Q99958 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC17.03■□□□□ 0.32
FOXC2Q99958 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC17.03■□□□□ 0.32
FOXC2Q99958 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
FOXC2Q99958 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
FOXC2Q99958 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
FOXC2Q99958 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
FOXC2Q99958 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
FOXC2Q99958 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
FOXC2Q99958 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
FOXC2Q99958 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
FOXC2Q99958 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
FOXC2Q99958 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
FOXC2Q99958 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC17.02■□□□□ 0.32
FOXC2Q99958 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
FOXC2Q99958 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
FOXC2Q99958 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
FOXC2Q99958 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
FOXC2Q99958 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC17.02■□□□□ 0.32
FOXC2Q99958 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
FOXC2Q99958 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
FOXC2Q99958 AL390955.1-201ENST00000428694 934 ntBASIC17.02■□□□□ 0.32
FOXC2Q99958 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC17.02■□□□□ 0.32
FOXC2Q99958 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC17.02■□□□□ 0.32
FOXC2Q99958 TPM4P1-201ENST00000436100 807 ntBASIC17.02■□□□□ 0.32
FOXC2Q99958 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
FOXC2Q99958 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
FOXC2Q99958 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC17.02■□□□□ 0.32
FOXC2Q99958 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC17.02■□□□□ 0.32
FOXC2Q99958 LINC01238-205ENST00000567549 1107 ntBASIC17.02■□□□□ 0.32
FOXC2Q99958 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC17.02■□□□□ 0.32
FOXC2Q99958 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC17.02■□□□□ 0.32
FOXC2Q99958 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC17.02■□□□□ 0.31
FOXC2Q99958 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
FOXC2Q99958 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
FOXC2Q99958 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
FOXC2Q99958 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.31
FOXC2Q99958 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC17.02■□□□□ 0.31
FOXC2Q99958 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
FOXC2Q99958 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
FOXC2Q99958 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
FOXC2Q99958 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC17.01■□□□□ 0.31
FOXC2Q99958 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC17.01■□□□□ 0.31
FOXC2Q99958 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
FOXC2Q99958 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
FOXC2Q99958 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC17.01■□□□□ 0.31
FOXC2Q99958 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
FOXC2Q99958 ATP5G1P1-201ENST00000448724 379 ntBASIC17.01■□□□□ 0.31
FOXC2Q99958 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
FOXC2Q99958 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC17.01■□□□□ 0.31
FOXC2Q99958 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC17.01■□□□□ 0.31
FOXC2Q99958 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
FOXC2Q99958 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
FOXC2Q99958 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
FOXC2Q99958 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
FOXC2Q99958 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
FOXC2Q99958 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
FOXC2Q99958 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
FOXC2Q99958 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
FOXC2Q99958 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
FOXC2Q99958 LGALS8-AS1-201ENST00000487567 1457 ntBASIC17■□□□□ 0.31
FOXC2Q99958 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC17■□□□□ 0.31
FOXC2Q99958 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC17■□□□□ 0.31
FOXC2Q99958 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
FOXC2Q99958 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC17■□□□□ 0.31
FOXC2Q99958 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC17■□□□□ 0.31
FOXC2Q99958 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC17■□□□□ 0.31
FOXC2Q99958 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
FOXC2Q99958 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
FOXC2Q99958 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
FOXC2Q99958 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC17■□□□□ 0.31
FOXC2Q99958 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC17■□□□□ 0.31
FOXC2Q99958 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
FOXC2Q99958 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC17■□□□□ 0.31
FOXC2Q99958 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC17■□□□□ 0.31
FOXC2Q99958 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
FOXC2Q99958 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
FOXC2Q99958 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC17■□□□□ 0.31
FOXC2Q99958 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC17■□□□□ 0.31
FOXC2Q99958 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
FOXC2Q99958 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
FOXC2Q99958 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC17■□□□□ 0.31
FOXC2Q99958 AL121906.2-201ENST00000621597 723 ntBASIC17■□□□□ 0.31
FOXC2Q99958 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
FOXC2Q99958 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms