Protein–RNA interactions for Protein: Q99675

CGRRF1, Cell growth regulator with RING finger domain protein 1, humanhuman

Predictions only

Length 332 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CGRRF1Q99675 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CGRRF1Q99675 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
CGRRF1Q99675 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC21.76■■□□□ 1.07
CGRRF1Q99675 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
CGRRF1Q99675 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CGRRF1Q99675 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CGRRF1Q99675 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
CGRRF1Q99675 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC21.76■■□□□ 1.07
CGRRF1Q99675 AC023632.3-201ENST00000521633 145 ntBASIC21.76■■□□□ 1.07
CGRRF1Q99675 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC21.76■■□□□ 1.07
CGRRF1Q99675 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC21.76■■□□□ 1.07
CGRRF1Q99675 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC21.76■■□□□ 1.07
CGRRF1Q99675 HLA-B-256ENST00000639848 1089 ntBASIC21.76■■□□□ 1.07
CGRRF1Q99675 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC21.76■■□□□ 1.07
CGRRF1Q99675 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC21.76■■□□□ 1.07
CGRRF1Q99675 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC21.76■■□□□ 1.07
CGRRF1Q99675 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
CGRRF1Q99675 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
CGRRF1Q99675 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
CGRRF1Q99675 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC21.75■■□□□ 1.07
CGRRF1Q99675 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC21.75■■□□□ 1.07
CGRRF1Q99675 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
CGRRF1Q99675 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
CGRRF1Q99675 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CGRRF1Q99675 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
CGRRF1Q99675 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CGRRF1Q99675 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
CGRRF1Q99675 AC060766.5-201ENST00000590539 871 ntBASIC21.75■■□□□ 1.07
CGRRF1Q99675 AL031963.3-201ENST00000606441 850 ntBASIC21.75■■□□□ 1.07
CGRRF1Q99675 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
CGRRF1Q99675 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CGRRF1Q99675 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC21.75■■□□□ 1.07
CGRRF1Q99675 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC21.75■■□□□ 1.07
CGRRF1Q99675 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
CGRRF1Q99675 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC21.75■■□□□ 1.07
CGRRF1Q99675 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
CGRRF1Q99675 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC21.74■■□□□ 1.07
CGRRF1Q99675 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
CGRRF1Q99675 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CGRRF1Q99675 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC21.74■■□□□ 1.07
CGRRF1Q99675 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CGRRF1Q99675 DENND3-207ENST00000518347 850 ntTSL 2 BASIC21.74■■□□□ 1.07
CGRRF1Q99675 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
CGRRF1Q99675 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CGRRF1Q99675 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
CGRRF1Q99675 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CGRRF1Q99675 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC21.74■■□□□ 1.07
CGRRF1Q99675 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
CGRRF1Q99675 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CGRRF1Q99675 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC21.74■■□□□ 1.07
CGRRF1Q99675 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC21.73■■□□□ 1.07
CGRRF1Q99675 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC21.73■■□□□ 1.07
CGRRF1Q99675 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC21.73■■□□□ 1.07
CGRRF1Q99675 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC21.73■■□□□ 1.07
CGRRF1Q99675 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC21.73■■□□□ 1.07
CGRRF1Q99675 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC21.73■■□□□ 1.07
CGRRF1Q99675 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CGRRF1Q99675 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC21.73■■□□□ 1.07
CGRRF1Q99675 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC21.73■■□□□ 1.07
CGRRF1Q99675 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC21.73■■□□□ 1.07
CGRRF1Q99675 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC21.73■■□□□ 1.07
CGRRF1Q99675 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC21.73■■□□□ 1.07
CGRRF1Q99675 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC21.73■■□□□ 1.07
CGRRF1Q99675 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
CGRRF1Q99675 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC21.73■■□□□ 1.07
CGRRF1Q99675 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
CGRRF1Q99675 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC21.73■■□□□ 1.07
CGRRF1Q99675 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
CGRRF1Q99675 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CGRRF1Q99675 KRT8P17-201ENST00000453110 1448 ntBASIC21.72■■□□□ 1.07
CGRRF1Q99675 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CGRRF1Q99675 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC21.72■■□□□ 1.07
CGRRF1Q99675 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC21.72■■□□□ 1.07
CGRRF1Q99675 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CGRRF1Q99675 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CGRRF1Q99675 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC21.72■■□□□ 1.07
CGRRF1Q99675 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC21.72■■□□□ 1.07
CGRRF1Q99675 PNMA6B-201ENST00000538162 1200 ntBASIC21.72■■□□□ 1.07
CGRRF1Q99675 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC21.72■■□□□ 1.07
CGRRF1Q99675 KRT18P6-201ENST00000555540 1265 ntBASIC21.72■■□□□ 1.07
CGRRF1Q99675 INO80E-214ENST00000620599 515 ntTSL 2 BASIC21.72■■□□□ 1.07
CGRRF1Q99675 AC092368.3-202ENST00000574180 1591 ntBASIC21.72■■□□□ 1.07
CGRRF1Q99675 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
CGRRF1Q99675 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC21.72■■□□□ 1.07
CGRRF1Q99675 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC21.72■■□□□ 1.07
CGRRF1Q99675 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
CGRRF1Q99675 KRT8P20-201ENST00000423953 1409 ntBASIC21.72■■□□□ 1.07
CGRRF1Q99675 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
CGRRF1Q99675 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
CGRRF1Q99675 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC21.71■■□□□ 1.07
CGRRF1Q99675 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC21.71■■□□□ 1.07
CGRRF1Q99675 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CGRRF1Q99675 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CGRRF1Q99675 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC21.71■■□□□ 1.07
CGRRF1Q99675 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC21.71■■□□□ 1.07
CGRRF1Q99675 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC21.71■■□□□ 1.07
CGRRF1Q99675 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC21.71■■□□□ 1.07
CGRRF1Q99675 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC21.71■■□□□ 1.07
CGRRF1Q99675 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CGRRF1Q99675 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC21.71■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms