Protein–RNA interactions for Protein: Q96PW8

CSPG4P5, Putative uncharacterized protein KIAA1920, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P5Q96PW8 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC20.83■□□□□ 0.93
CSPG4P5Q96PW8 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
CSPG4P5Q96PW8 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC20.83■□□□□ 0.92
CSPG4P5Q96PW8 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
CSPG4P5Q96PW8 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
CSPG4P5Q96PW8 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
CSPG4P5Q96PW8 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC20.83■□□□□ 0.92
CSPG4P5Q96PW8 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
CSPG4P5Q96PW8 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CSPG4P5Q96PW8 PTBP1P-201ENST00000554374 1601 ntBASIC20.82■□□□□ 0.92
CSPG4P5Q96PW8 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CSPG4P5Q96PW8 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CSPG4P5Q96PW8 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CSPG4P5Q96PW8 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CSPG4P5Q96PW8 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
CSPG4P5Q96PW8 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
CSPG4P5Q96PW8 AC083906.2-201ENST00000511578 360 ntBASIC20.82■□□□□ 0.92
CSPG4P5Q96PW8 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC20.82■□□□□ 0.92
CSPG4P5Q96PW8 AL121832.2-201ENST00000610979 668 ntBASIC20.82■□□□□ 0.92
CSPG4P5Q96PW8 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
CSPG4P5Q96PW8 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CSPG4P5Q96PW8 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CSPG4P5Q96PW8 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CSPG4P5Q96PW8 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CSPG4P5Q96PW8 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
CSPG4P5Q96PW8 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC20.82■□□□□ 0.92
CSPG4P5Q96PW8 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC20.81■□□□□ 0.92
CSPG4P5Q96PW8 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
CSPG4P5Q96PW8 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC20.81■□□□□ 0.92
CSPG4P5Q96PW8 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
CSPG4P5Q96PW8 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CSPG4P5Q96PW8 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC20.81■□□□□ 0.92
CSPG4P5Q96PW8 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC20.81■□□□□ 0.92
CSPG4P5Q96PW8 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CSPG4P5Q96PW8 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
CSPG4P5Q96PW8 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC20.81■□□□□ 0.92
CSPG4P5Q96PW8 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CSPG4P5Q96PW8 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
CSPG4P5Q96PW8 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC20.81■□□□□ 0.92
CSPG4P5Q96PW8 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CSPG4P5Q96PW8 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CSPG4P5Q96PW8 PCDHAC2-203ENST00000615316 3011 ntBASIC20.81■□□□□ 0.92
CSPG4P5Q96PW8 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC20.81■□□□□ 0.92
CSPG4P5Q96PW8 SLC25A24-204ENST00000569674 2357 ntBASIC20.81■□□□□ 0.92
CSPG4P5Q96PW8 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
CSPG4P5Q96PW8 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC20.81■□□□□ 0.92
CSPG4P5Q96PW8 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
CSPG4P5Q96PW8 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC20.8■□□□□ 0.92
CSPG4P5Q96PW8 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC20.8■□□□□ 0.92
CSPG4P5Q96PW8 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CSPG4P5Q96PW8 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CSPG4P5Q96PW8 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC20.8■□□□□ 0.92
CSPG4P5Q96PW8 LSM12P1-201ENST00000411836 588 ntBASIC20.8■□□□□ 0.92
CSPG4P5Q96PW8 BX276092.2-201ENST00000417668 665 ntBASIC20.8■□□□□ 0.92
CSPG4P5Q96PW8 NCF1B-203ENST00000435988 1254 ntBASIC20.8■□□□□ 0.92
CSPG4P5Q96PW8 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC20.8■□□□□ 0.92
CSPG4P5Q96PW8 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC20.8■□□□□ 0.92
CSPG4P5Q96PW8 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC20.8■□□□□ 0.92
CSPG4P5Q96PW8 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC20.8■□□□□ 0.92
CSPG4P5Q96PW8 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC20.8■□□□□ 0.92
CSPG4P5Q96PW8 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC20.8■□□□□ 0.92
CSPG4P5Q96PW8 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
CSPG4P5Q96PW8 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CSPG4P5Q96PW8 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC20.8■□□□□ 0.92
CSPG4P5Q96PW8 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC20.8■□□□□ 0.92
CSPG4P5Q96PW8 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
CSPG4P5Q96PW8 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
CSPG4P5Q96PW8 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
CSPG4P5Q96PW8 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CSPG4P5Q96PW8 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
CSPG4P5Q96PW8 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC20.79■□□□□ 0.92
CSPG4P5Q96PW8 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC20.79■□□□□ 0.92
CSPG4P5Q96PW8 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
CSPG4P5Q96PW8 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CSPG4P5Q96PW8 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CSPG4P5Q96PW8 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC20.79■□□□□ 0.92
CSPG4P5Q96PW8 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
CSPG4P5Q96PW8 GUSBP6-202ENST00000438529 1198 ntBASIC20.79■□□□□ 0.92
CSPG4P5Q96PW8 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
CSPG4P5Q96PW8 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC20.79■□□□□ 0.92
CSPG4P5Q96PW8 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
CSPG4P5Q96PW8 C2orf69P4-201ENST00000565394 541 ntBASIC20.79■□□□□ 0.92
CSPG4P5Q96PW8 WT1-AS_3.1-201ENST00000613262 234 ntBASIC20.79■□□□□ 0.92
CSPG4P5Q96PW8 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC20.79■□□□□ 0.92
CSPG4P5Q96PW8 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
CSPG4P5Q96PW8 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CSPG4P5Q96PW8 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
CSPG4P5Q96PW8 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
CSPG4P5Q96PW8 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CSPG4P5Q96PW8 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
CSPG4P5Q96PW8 TCF3P1-201ENST00000423021 1937 ntBASIC20.78■□□□□ 0.92
CSPG4P5Q96PW8 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC20.78■□□□□ 0.92
CSPG4P5Q96PW8 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CSPG4P5Q96PW8 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CSPG4P5Q96PW8 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CSPG4P5Q96PW8 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CSPG4P5Q96PW8 ME2-218ENST00000640965 2476 ntTSL 5 BASIC20.78■□□□□ 0.92
CSPG4P5Q96PW8 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CSPG4P5Q96PW8 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
CSPG4P5Q96PW8 BX119927.1-201ENST00000636596 1552 ntBASIC20.78■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 42.1 ms