Protein–RNA interactions for Protein: Q96NU0

CNTNAP3B, Contactin-associated protein-like 3B, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3BQ96NU0 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
CNTNAP3BQ96NU0 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC19.3■□□□□ 0.68
CNTNAP3BQ96NU0 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CNTNAP3BQ96NU0 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CNTNAP3BQ96NU0 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC19.3■□□□□ 0.68
CNTNAP3BQ96NU0 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC19.3■□□□□ 0.68
CNTNAP3BQ96NU0 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CNTNAP3BQ96NU0 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC19.3■□□□□ 0.68
CNTNAP3BQ96NU0 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CNTNAP3BQ96NU0 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC19.3■□□□□ 0.68
CNTNAP3BQ96NU0 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CNTNAP3BQ96NU0 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
CNTNAP3BQ96NU0 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC19.3■□□□□ 0.68
CNTNAP3BQ96NU0 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CNTNAP3BQ96NU0 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CNTNAP3BQ96NU0 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC19.3■□□□□ 0.68
CNTNAP3BQ96NU0 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
CNTNAP3BQ96NU0 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CNTNAP3BQ96NU0 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
CNTNAP3BQ96NU0 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
CNTNAP3BQ96NU0 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC19.3■□□□□ 0.68
CNTNAP3BQ96NU0 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
CNTNAP3BQ96NU0 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CNTNAP3BQ96NU0 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CNTNAP3BQ96NU0 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CNTNAP3BQ96NU0 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CNTNAP3BQ96NU0 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CNTNAP3BQ96NU0 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CNTNAP3BQ96NU0 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC19.29■□□□□ 0.68
CNTNAP3BQ96NU0 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC19.29■□□□□ 0.68
CNTNAP3BQ96NU0 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
CNTNAP3BQ96NU0 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
CNTNAP3BQ96NU0 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC19.29■□□□□ 0.68
CNTNAP3BQ96NU0 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CNTNAP3BQ96NU0 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CNTNAP3BQ96NU0 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC19.29■□□□□ 0.68
CNTNAP3BQ96NU0 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
CNTNAP3BQ96NU0 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC19.29■□□□□ 0.68
CNTNAP3BQ96NU0 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC19.29■□□□□ 0.68
CNTNAP3BQ96NU0 AC116562.2-201ENST00000507042 360 ntBASIC19.29■□□□□ 0.68
CNTNAP3BQ96NU0 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC19.29■□□□□ 0.68
CNTNAP3BQ96NU0 AC069148.1-201ENST00000608741 768 ntBASIC19.29■□□□□ 0.68
CNTNAP3BQ96NU0 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CNTNAP3BQ96NU0 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CNTNAP3BQ96NU0 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CNTNAP3BQ96NU0 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CNTNAP3BQ96NU0 RARG-204ENST00000543726 1779 ntTSL 2 BASIC19.29■□□□□ 0.68
CNTNAP3BQ96NU0 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
CNTNAP3BQ96NU0 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CNTNAP3BQ96NU0 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
CNTNAP3BQ96NU0 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
CNTNAP3BQ96NU0 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC19.28■□□□□ 0.68
CNTNAP3BQ96NU0 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC19.28■□□□□ 0.68
CNTNAP3BQ96NU0 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
CNTNAP3BQ96NU0 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CNTNAP3BQ96NU0 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CNTNAP3BQ96NU0 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CNTNAP3BQ96NU0 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC19.28■□□□□ 0.68
CNTNAP3BQ96NU0 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CNTNAP3BQ96NU0 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CNTNAP3BQ96NU0 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
CNTNAP3BQ96NU0 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC19.28■□□□□ 0.68
CNTNAP3BQ96NU0 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CNTNAP3BQ96NU0 SAPCD2P1-201ENST00000395413 1184 ntBASIC19.28■□□□□ 0.68
CNTNAP3BQ96NU0 PGM5P4-201ENST00000421970 445 ntBASIC19.28■□□□□ 0.68
CNTNAP3BQ96NU0 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC19.28■□□□□ 0.68
CNTNAP3BQ96NU0 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
CNTNAP3BQ96NU0 SERP1-205ENST00000487153 657 ntTSL 4 BASIC19.28■□□□□ 0.68
CNTNAP3BQ96NU0 AP002982.1-201ENST00000492365 877 ntBASIC19.28■□□□□ 0.68
CNTNAP3BQ96NU0 C2orf69P3-201ENST00000565542 1120 ntBASIC19.28■□□□□ 0.68
CNTNAP3BQ96NU0 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CNTNAP3BQ96NU0 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CNTNAP3BQ96NU0 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC19.28■□□□□ 0.68
CNTNAP3BQ96NU0 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC19.28■□□□□ 0.68
CNTNAP3BQ96NU0 C9orf163-202ENST00000624034 2573 ntBASIC19.28■□□□□ 0.68
CNTNAP3BQ96NU0 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC19.28■□□□□ 0.68
CNTNAP3BQ96NU0 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CNTNAP3BQ96NU0 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CNTNAP3BQ96NU0 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
CNTNAP3BQ96NU0 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC19.27■□□□□ 0.68
CNTNAP3BQ96NU0 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CNTNAP3BQ96NU0 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CNTNAP3BQ96NU0 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC19.27■□□□□ 0.68
CNTNAP3BQ96NU0 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CNTNAP3BQ96NU0 AL845331.1-201ENST00000424978 1190 ntBASIC19.27■□□□□ 0.68
CNTNAP3BQ96NU0 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CNTNAP3BQ96NU0 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC19.27■□□□□ 0.68
CNTNAP3BQ96NU0 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC19.27■□□□□ 0.68
CNTNAP3BQ96NU0 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC19.27■□□□□ 0.68
CNTNAP3BQ96NU0 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
CNTNAP3BQ96NU0 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
CNTNAP3BQ96NU0 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
CNTNAP3BQ96NU0 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CNTNAP3BQ96NU0 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
CNTNAP3BQ96NU0 NFE2L3P1-201ENST00000588207 1959 ntBASIC19.26■□□□□ 0.67
CNTNAP3BQ96NU0 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC19.26■□□□□ 0.67
CNTNAP3BQ96NU0 KRT8P45-201ENST00000414328 1447 ntBASIC19.26■□□□□ 0.67
CNTNAP3BQ96NU0 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
CNTNAP3BQ96NU0 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CNTNAP3BQ96NU0 AL117328.2-201ENST00000624617 1940 ntBASIC19.26■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms