Protein–RNA interactions for Protein: Q96LT7

C9orf72, Guanine nucleotide exchange C9orf72, humanhuman

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf72Q96LT7 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
C9orf72Q96LT7 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
C9orf72Q96LT7 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
C9orf72Q96LT7 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
C9orf72Q96LT7 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
C9orf72Q96LT7 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
C9orf72Q96LT7 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
C9orf72Q96LT7 AC116562.4-201ENST00000641316 2276 ntBASIC20.71■□□□□ 0.91
C9orf72Q96LT7 AL158211.5-201ENST00000623583 2518 ntBASIC20.71■□□□□ 0.91
C9orf72Q96LT7 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
C9orf72Q96LT7 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
C9orf72Q96LT7 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
C9orf72Q96LT7 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC20.71■□□□□ 0.91
C9orf72Q96LT7 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC20.71■□□□□ 0.91
C9orf72Q96LT7 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC20.71■□□□□ 0.91
C9orf72Q96LT7 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC20.71■□□□□ 0.91
C9orf72Q96LT7 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
C9orf72Q96LT7 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
C9orf72Q96LT7 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC20.71■□□□□ 0.91
C9orf72Q96LT7 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
C9orf72Q96LT7 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
C9orf72Q96LT7 LBX2-AS1-202ENST00000603175 2083 ntBASIC20.71■□□□□ 0.91
C9orf72Q96LT7 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
C9orf72Q96LT7 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
C9orf72Q96LT7 GAS2L1P2-201ENST00000436355 1356 ntBASIC20.71■□□□□ 0.91
C9orf72Q96LT7 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
C9orf72Q96LT7 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC20.7■□□□□ 0.91
C9orf72Q96LT7 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
C9orf72Q96LT7 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
C9orf72Q96LT7 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
C9orf72Q96LT7 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
C9orf72Q96LT7 NAA20-201ENST00000310450 920 ntTSL 2 BASIC20.7■□□□□ 0.9
C9orf72Q96LT7 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
C9orf72Q96LT7 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
C9orf72Q96LT7 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
C9orf72Q96LT7 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC20.7■□□□□ 0.9
C9orf72Q96LT7 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC20.7■□□□□ 0.9
C9orf72Q96LT7 AC138907.5-202ENST00000569484 235 ntBASIC20.7■□□□□ 0.9
C9orf72Q96LT7 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
C9orf72Q96LT7 AC080038.1-201ENST00000611274 1154 ntBASIC20.7■□□□□ 0.9
C9orf72Q96LT7 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
C9orf72Q96LT7 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
C9orf72Q96LT7 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
C9orf72Q96LT7 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
C9orf72Q96LT7 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC20.7■□□□□ 0.9
C9orf72Q96LT7 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
C9orf72Q96LT7 KRT16P2-201ENST00000414673 1423 ntBASIC20.7■□□□□ 0.9
C9orf72Q96LT7 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
C9orf72Q96LT7 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC20.69■□□□□ 0.9
C9orf72Q96LT7 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC20.69■□□□□ 0.9
C9orf72Q96LT7 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC20.69■□□□□ 0.9
C9orf72Q96LT7 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
C9orf72Q96LT7 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
C9orf72Q96LT7 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
C9orf72Q96LT7 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC20.69■□□□□ 0.9
C9orf72Q96LT7 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
C9orf72Q96LT7 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
C9orf72Q96LT7 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC20.69■□□□□ 0.9
C9orf72Q96LT7 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
C9orf72Q96LT7 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC20.69■□□□□ 0.9
C9orf72Q96LT7 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
C9orf72Q96LT7 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC20.69■□□□□ 0.9
C9orf72Q96LT7 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
C9orf72Q96LT7 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
C9orf72Q96LT7 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC20.69■□□□□ 0.9
C9orf72Q96LT7 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC20.69■□□□□ 0.9
C9orf72Q96LT7 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC20.69■□□□□ 0.9
C9orf72Q96LT7 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
C9orf72Q96LT7 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
C9orf72Q96LT7 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
C9orf72Q96LT7 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
C9orf72Q96LT7 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
C9orf72Q96LT7 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
C9orf72Q96LT7 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
C9orf72Q96LT7 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
C9orf72Q96LT7 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
C9orf72Q96LT7 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC20.69■□□□□ 0.9
C9orf72Q96LT7 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC20.69■□□□□ 0.9
C9orf72Q96LT7 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC20.69■□□□□ 0.9
C9orf72Q96LT7 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
C9orf72Q96LT7 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
C9orf72Q96LT7 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
C9orf72Q96LT7 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
C9orf72Q96LT7 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
C9orf72Q96LT7 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
C9orf72Q96LT7 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
C9orf72Q96LT7 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC20.68■□□□□ 0.9
C9orf72Q96LT7 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
C9orf72Q96LT7 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
C9orf72Q96LT7 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC20.68■□□□□ 0.9
C9orf72Q96LT7 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
C9orf72Q96LT7 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
C9orf72Q96LT7 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
C9orf72Q96LT7 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC20.68■□□□□ 0.9
C9orf72Q96LT7 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC20.68■□□□□ 0.9
C9orf72Q96LT7 AC116050.2-201ENST00000612102 1779 ntBASIC20.68■□□□□ 0.9
C9orf72Q96LT7 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
C9orf72Q96LT7 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC20.68■□□□□ 0.9
C9orf72Q96LT7 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
C9orf72Q96LT7 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC20.68■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 19.8 ms