Protein–RNA interactions for Protein: Q96KK3

KCNS1, Potassium voltage-gated channel subfamily S member 1, humanhuman

Predictions only

Length 526 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNS1Q96KK3 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC15.33■□□□□ 0.04
KCNS1Q96KK3 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
KCNS1Q96KK3 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
KCNS1Q96KK3 AL136162.1-201ENST00000607711 1078 ntBASIC15.33■□□□□ 0.04
KCNS1Q96KK3 MPST-208ENST00000628507 698 ntTSL 5 BASIC15.33■□□□□ 0.04
KCNS1Q96KK3 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
KCNS1Q96KK3 AC135279.3-201ENST00000610945 1311 ntBASIC15.33■□□□□ 0.04
KCNS1Q96KK3 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
KCNS1Q96KK3 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC15.33■□□□□ 0.04
KCNS1Q96KK3 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC15.33■□□□□ 0.04
KCNS1Q96KK3 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
KCNS1Q96KK3 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
KCNS1Q96KK3 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
KCNS1Q96KK3 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
KCNS1Q96KK3 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
KCNS1Q96KK3 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC15.33■□□□□ 0.04
KCNS1Q96KK3 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
KCNS1Q96KK3 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
KCNS1Q96KK3 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC15.33■□□□□ 0.04
KCNS1Q96KK3 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
KCNS1Q96KK3 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
KCNS1Q96KK3 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC15.32■□□□□ 0.04
KCNS1Q96KK3 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
KCNS1Q96KK3 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
KCNS1Q96KK3 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
KCNS1Q96KK3 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
KCNS1Q96KK3 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC15.32■□□□□ 0.04
KCNS1Q96KK3 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC15.32■□□□□ 0.04
KCNS1Q96KK3 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
KCNS1Q96KK3 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
KCNS1Q96KK3 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
KCNS1Q96KK3 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
KCNS1Q96KK3 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
KCNS1Q96KK3 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC15.32■□□□□ 0.04
KCNS1Q96KK3 MFF-208ENST00000409616 1247 ntTSL 5 BASIC15.32■□□□□ 0.04
KCNS1Q96KK3 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC15.32■□□□□ 0.04
KCNS1Q96KK3 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC15.32■□□□□ 0.04
KCNS1Q96KK3 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC15.32■□□□□ 0.04
KCNS1Q96KK3 AC105233.4-201ENST00000642045 216 ntBASIC15.32■□□□□ 0.04
KCNS1Q96KK3 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
KCNS1Q96KK3 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
KCNS1Q96KK3 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC15.32■□□□□ 0.04
KCNS1Q96KK3 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
KCNS1Q96KK3 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
KCNS1Q96KK3 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
KCNS1Q96KK3 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
KCNS1Q96KK3 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
KCNS1Q96KK3 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
KCNS1Q96KK3 AC121338.2-201ENST00000622535 1744 ntBASIC15.31■□□□□ 0.04
KCNS1Q96KK3 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
KCNS1Q96KK3 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
KCNS1Q96KK3 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
KCNS1Q96KK3 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
KCNS1Q96KK3 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC15.31■□□□□ 0.04
KCNS1Q96KK3 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
KCNS1Q96KK3 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
KCNS1Q96KK3 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC15.31■□□□□ 0.04
KCNS1Q96KK3 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC15.31■□□□□ 0.04
KCNS1Q96KK3 AC024257.2-201ENST00000549699 147 ntBASIC15.31■□□□□ 0.04
KCNS1Q96KK3 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
KCNS1Q96KK3 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC15.31■□□□□ 0.04
KCNS1Q96KK3 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC15.31■□□□□ 0.04
KCNS1Q96KK3 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC15.31■□□□□ 0.04
KCNS1Q96KK3 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
KCNS1Q96KK3 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
KCNS1Q96KK3 AC055733.4-201ENST00000638462 1354 ntBASIC15.31■□□□□ 0.04
KCNS1Q96KK3 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
KCNS1Q96KK3 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC15.31■□□□□ 0.04
KCNS1Q96KK3 AC020763.4-201ENST00000623414 4170 ntBASIC15.31■□□□□ 0.04
KCNS1Q96KK3 WAC-202ENST00000347934 2839 ntTSL 5 BASIC15.31■□□□□ 0.04
KCNS1Q96KK3 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
KCNS1Q96KK3 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
KCNS1Q96KK3 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
KCNS1Q96KK3 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
KCNS1Q96KK3 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC15.31■□□□□ 0.04
KCNS1Q96KK3 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC15.31■□□□□ 0.04
KCNS1Q96KK3 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
KCNS1Q96KK3 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC15.31■□□□□ 0.04
KCNS1Q96KK3 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC15.31■□□□□ 0.04
KCNS1Q96KK3 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
KCNS1Q96KK3 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
KCNS1Q96KK3 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC15.31■□□□□ 0.04
KCNS1Q96KK3 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC15.3■□□□□ 0.04
KCNS1Q96KK3 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
KCNS1Q96KK3 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
KCNS1Q96KK3 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
KCNS1Q96KK3 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
KCNS1Q96KK3 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
KCNS1Q96KK3 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
KCNS1Q96KK3 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
KCNS1Q96KK3 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
KCNS1Q96KK3 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
KCNS1Q96KK3 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
KCNS1Q96KK3 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
KCNS1Q96KK3 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
KCNS1Q96KK3 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC15.3■□□□□ 0.04
KCNS1Q96KK3 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC15.3■□□□□ 0.04
KCNS1Q96KK3 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
KCNS1Q96KK3 AC027682.1-201ENST00000562846 899 ntBASIC15.3■□□□□ 0.04
KCNS1Q96KK3 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms