Protein–RNA interactions for Protein: Q96KA5

CLPTM1L, Cleft lip and palate transmembrane protein 1-like protein, humanhuman

Predictions only

Length 538 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1LQ96KA5 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
CLPTM1LQ96KA5 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC19.34■□□□□ 0.69
CLPTM1LQ96KA5 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC19.34■□□□□ 0.69
CLPTM1LQ96KA5 AC136469.2-201ENST00000623944 1028 ntBASIC19.34■□□□□ 0.69
CLPTM1LQ96KA5 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CLPTM1LQ96KA5 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
CLPTM1LQ96KA5 AP004607.4-201ENST00000530158 1459 ntBASIC19.34■□□□□ 0.69
CLPTM1LQ96KA5 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CLPTM1LQ96KA5 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC19.34■□□□□ 0.69
CLPTM1LQ96KA5 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC19.33■□□□□ 0.69
CLPTM1LQ96KA5 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
CLPTM1LQ96KA5 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CLPTM1LQ96KA5 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
CLPTM1LQ96KA5 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC19.33■□□□□ 0.69
CLPTM1LQ96KA5 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
CLPTM1LQ96KA5 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC19.33■□□□□ 0.69
CLPTM1LQ96KA5 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.69
CLPTM1LQ96KA5 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
CLPTM1LQ96KA5 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
CLPTM1LQ96KA5 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
CLPTM1LQ96KA5 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CLPTM1LQ96KA5 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CLPTM1LQ96KA5 ADK-206ENST00000541550 2222 ntTSL 2 BASIC19.33■□□□□ 0.68
CLPTM1LQ96KA5 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CLPTM1LQ96KA5 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
CLPTM1LQ96KA5 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
CLPTM1LQ96KA5 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
CLPTM1LQ96KA5 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
CLPTM1LQ96KA5 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CLPTM1LQ96KA5 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
CLPTM1LQ96KA5 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CLPTM1LQ96KA5 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
CLPTM1LQ96KA5 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CLPTM1LQ96KA5 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
CLPTM1LQ96KA5 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CLPTM1LQ96KA5 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CLPTM1LQ96KA5 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
CLPTM1LQ96KA5 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC19.32■□□□□ 0.68
CLPTM1LQ96KA5 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CLPTM1LQ96KA5 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CLPTM1LQ96KA5 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CLPTM1LQ96KA5 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CLPTM1LQ96KA5 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CLPTM1LQ96KA5 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CLPTM1LQ96KA5 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CLPTM1LQ96KA5 MIR2861-201ENST00000636310 90 ntBASIC19.32■□□□□ 0.68
CLPTM1LQ96KA5 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
CLPTM1LQ96KA5 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CLPTM1LQ96KA5 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
CLPTM1LQ96KA5 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CLPTM1LQ96KA5 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC19.32■□□□□ 0.68
CLPTM1LQ96KA5 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC19.32■□□□□ 0.68
CLPTM1LQ96KA5 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
CLPTM1LQ96KA5 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CLPTM1LQ96KA5 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC19.31■□□□□ 0.68
CLPTM1LQ96KA5 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
CLPTM1LQ96KA5 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
CLPTM1LQ96KA5 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CLPTM1LQ96KA5 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
CLPTM1LQ96KA5 AR-207ENST00000612010 3896 ntTSL 5 BASIC19.31■□□□□ 0.68
CLPTM1LQ96KA5 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
CLPTM1LQ96KA5 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
CLPTM1LQ96KA5 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CLPTM1LQ96KA5 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
CLPTM1LQ96KA5 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
CLPTM1LQ96KA5 AC009299.2-201ENST00000482477 511 ntBASIC19.31■□□□□ 0.68
CLPTM1LQ96KA5 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC19.31■□□□□ 0.68
CLPTM1LQ96KA5 QDPR-206ENST00000508623 601 ntTSL 3 BASIC19.31■□□□□ 0.68
CLPTM1LQ96KA5 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC19.31■□□□□ 0.68
CLPTM1LQ96KA5 AL356740.2-201ENST00000601559 647 ntBASIC19.31■□□□□ 0.68
CLPTM1LQ96KA5 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC19.31■□□□□ 0.68
CLPTM1LQ96KA5 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CLPTM1LQ96KA5 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC19.31■□□□□ 0.68
CLPTM1LQ96KA5 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
CLPTM1LQ96KA5 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CLPTM1LQ96KA5 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC19.31■□□□□ 0.68
CLPTM1LQ96KA5 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
CLPTM1LQ96KA5 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CLPTM1LQ96KA5 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CLPTM1LQ96KA5 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
CLPTM1LQ96KA5 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CLPTM1LQ96KA5 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
CLPTM1LQ96KA5 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC19.3■□□□□ 0.68
CLPTM1LQ96KA5 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC19.3■□□□□ 0.68
CLPTM1LQ96KA5 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CLPTM1LQ96KA5 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CLPTM1LQ96KA5 FXN-202ENST00000396364 980 ntTSL 5 BASIC19.3■□□□□ 0.68
CLPTM1LQ96KA5 KRT16P3-201ENST00000439127 1283 ntBASIC19.3■□□□□ 0.68
CLPTM1LQ96KA5 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC19.3■□□□□ 0.68
CLPTM1LQ96KA5 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC19.3■□□□□ 0.68
CLPTM1LQ96KA5 AL138724.1-201ENST00000606771 1088 ntBASIC19.3■□□□□ 0.68
CLPTM1LQ96KA5 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
CLPTM1LQ96KA5 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC19.3■□□□□ 0.68
CLPTM1LQ96KA5 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
CLPTM1LQ96KA5 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
CLPTM1LQ96KA5 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CLPTM1LQ96KA5 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC19.3■□□□□ 0.68
CLPTM1LQ96KA5 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CLPTM1LQ96KA5 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
CLPTM1LQ96KA5 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 43.4 ms