Protein–RNA interactions for Protein: Q96K30

RITA1, RBPJ-interacting and tubulin-associated protein 1, humanhuman

Predictions only

Length 269 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RITA1Q96K30 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC16.21■□□□□ 0.19
RITA1Q96K30 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC16.21■□□□□ 0.19
RITA1Q96K30 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC16.21■□□□□ 0.19
RITA1Q96K30 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
RITA1Q96K30 MKRN4P-201ENST00000444706 1521 ntBASIC16.21■□□□□ 0.19
RITA1Q96K30 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC16.21■□□□□ 0.19
RITA1Q96K30 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
RITA1Q96K30 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
RITA1Q96K30 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
RITA1Q96K30 AC006970.2-201ENST00000450065 779 ntBASIC16.21■□□□□ 0.19
RITA1Q96K30 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC16.21■□□□□ 0.19
RITA1Q96K30 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
RITA1Q96K30 OAS3-207ENST00000551007 998 ntTSL 2 BASIC16.21■□□□□ 0.19
RITA1Q96K30 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
RITA1Q96K30 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
RITA1Q96K30 AC105020.6-201ENST00000621523 1217 ntBASIC16.21■□□□□ 0.19
RITA1Q96K30 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC16.21■□□□□ 0.19
RITA1Q96K30 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
RITA1Q96K30 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
RITA1Q96K30 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
RITA1Q96K30 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC16.21■□□□□ 0.18
RITA1Q96K30 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.18
RITA1Q96K30 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC16.21■□□□□ 0.18
RITA1Q96K30 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.18
RITA1Q96K30 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RITA1Q96K30 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC16.2■□□□□ 0.18
RITA1Q96K30 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC16.2■□□□□ 0.18
RITA1Q96K30 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC16.2■□□□□ 0.18
RITA1Q96K30 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
RITA1Q96K30 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
RITA1Q96K30 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RITA1Q96K30 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
RITA1Q96K30 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC16.2■□□□□ 0.18
RITA1Q96K30 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
RITA1Q96K30 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC16.2■□□□□ 0.18
RITA1Q96K30 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
RITA1Q96K30 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC16.2■□□□□ 0.18
RITA1Q96K30 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
RITA1Q96K30 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC16.2■□□□□ 0.18
RITA1Q96K30 GXYLT1P5-201ENST00000614548 1189 ntBASIC16.2■□□□□ 0.18
RITA1Q96K30 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC16.2■□□□□ 0.18
RITA1Q96K30 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC16.2■□□□□ 0.18
RITA1Q96K30 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
RITA1Q96K30 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
RITA1Q96K30 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC16.2■□□□□ 0.18
RITA1Q96K30 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RITA1Q96K30 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RITA1Q96K30 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
RITA1Q96K30 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC16.19■□□□□ 0.18
RITA1Q96K30 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
RITA1Q96K30 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC16.19■□□□□ 0.18
RITA1Q96K30 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RITA1Q96K30 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RITA1Q96K30 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
RITA1Q96K30 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
RITA1Q96K30 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC16.19■□□□□ 0.18
RITA1Q96K30 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RITA1Q96K30 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
RITA1Q96K30 BX276092.2-201ENST00000417668 665 ntBASIC16.19■□□□□ 0.18
RITA1Q96K30 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
RITA1Q96K30 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC16.19■□□□□ 0.18
RITA1Q96K30 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC16.19■□□□□ 0.18
RITA1Q96K30 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC16.19■□□□□ 0.18
RITA1Q96K30 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
RITA1Q96K30 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
RITA1Q96K30 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RITA1Q96K30 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC16.19■□□□□ 0.18
RITA1Q96K30 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RITA1Q96K30 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
RITA1Q96K30 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RITA1Q96K30 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RITA1Q96K30 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
RITA1Q96K30 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
RITA1Q96K30 AFG3L1P-217ENST00000557444 2447 ntBASIC16.18■□□□□ 0.18
RITA1Q96K30 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
RITA1Q96K30 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
RITA1Q96K30 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC16.18■□□□□ 0.18
RITA1Q96K30 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
RITA1Q96K30 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC16.18■□□□□ 0.18
RITA1Q96K30 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
RITA1Q96K30 NCF1B-203ENST00000435988 1254 ntBASIC16.18■□□□□ 0.18
RITA1Q96K30 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
RITA1Q96K30 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC16.18■□□□□ 0.18
RITA1Q96K30 AC090192.1-201ENST00000517740 490 ntBASIC16.18■□□□□ 0.18
RITA1Q96K30 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC16.18■□□□□ 0.18
RITA1Q96K30 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC16.18■□□□□ 0.18
RITA1Q96K30 TK2-208ENST00000545043 1120 ntTSL 2 BASIC16.18■□□□□ 0.18
RITA1Q96K30 ISCU-212ENST00000547005 795 ntTSL 3 BASIC16.18■□□□□ 0.18
RITA1Q96K30 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
RITA1Q96K30 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC16.18■□□□□ 0.18
RITA1Q96K30 AL121832.2-201ENST00000610979 668 ntBASIC16.18■□□□□ 0.18
RITA1Q96K30 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
RITA1Q96K30 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
RITA1Q96K30 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
RITA1Q96K30 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
RITA1Q96K30 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
RITA1Q96K30 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC16.18■□□□□ 0.18
RITA1Q96K30 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
RITA1Q96K30 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
RITA1Q96K30 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC16.18■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms