Protein–RNA interactions for Protein: Q96FS4

SIPA1, Signal-induced proliferation-associated protein 1, humanhuman

Predictions only

Length 1,042 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIPA1Q96FS4 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SIPA1Q96FS4 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SIPA1Q96FS4 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
SIPA1Q96FS4 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC20.28■□□□□ 0.84
SIPA1Q96FS4 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SIPA1Q96FS4 AL024507.2-201ENST00000606070 2574 ntBASIC20.28■□□□□ 0.84
SIPA1Q96FS4 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SIPA1Q96FS4 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
SIPA1Q96FS4 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SIPA1Q96FS4 EP400NL-214ENST00000641289 2402 ntBASIC20.27■□□□□ 0.84
SIPA1Q96FS4 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
SIPA1Q96FS4 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
SIPA1Q96FS4 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SIPA1Q96FS4 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC20.27■□□□□ 0.84
SIPA1Q96FS4 AL049796.1-201ENST00000565336 1766 ntBASIC20.27■□□□□ 0.84
SIPA1Q96FS4 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
SIPA1Q96FS4 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
SIPA1Q96FS4 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SIPA1Q96FS4 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
SIPA1Q96FS4 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC20.27■□□□□ 0.84
SIPA1Q96FS4 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC20.27■□□□□ 0.84
SIPA1Q96FS4 REXO1L12P-201ENST00000622156 912 ntBASIC20.27■□□□□ 0.84
SIPA1Q96FS4 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
SIPA1Q96FS4 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC20.27■□□□□ 0.84
SIPA1Q96FS4 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC20.27■□□□□ 0.83
SIPA1Q96FS4 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
SIPA1Q96FS4 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SIPA1Q96FS4 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SIPA1Q96FS4 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
SIPA1Q96FS4 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
SIPA1Q96FS4 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC20.26■□□□□ 0.83
SIPA1Q96FS4 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
SIPA1Q96FS4 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
SIPA1Q96FS4 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC20.26■□□□□ 0.83
SIPA1Q96FS4 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
SIPA1Q96FS4 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC20.26■□□□□ 0.83
SIPA1Q96FS4 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC20.26■□□□□ 0.83
SIPA1Q96FS4 RARRES2P10-201ENST00000564312 460 ntBASIC20.26■□□□□ 0.83
SIPA1Q96FS4 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC20.26■□□□□ 0.83
SIPA1Q96FS4 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
SIPA1Q96FS4 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC20.26■□□□□ 0.83
SIPA1Q96FS4 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC20.26■□□□□ 0.83
SIPA1Q96FS4 AL121829.2-201ENST00000620908 328 ntBASIC20.26■□□□□ 0.83
SIPA1Q96FS4 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SIPA1Q96FS4 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SIPA1Q96FS4 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
SIPA1Q96FS4 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC20.26■□□□□ 0.83
SIPA1Q96FS4 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC20.26■□□□□ 0.83
SIPA1Q96FS4 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SIPA1Q96FS4 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
SIPA1Q96FS4 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SIPA1Q96FS4 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
SIPA1Q96FS4 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
SIPA1Q96FS4 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
SIPA1Q96FS4 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SIPA1Q96FS4 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
SIPA1Q96FS4 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SIPA1Q96FS4 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SIPA1Q96FS4 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC20.25■□□□□ 0.83
SIPA1Q96FS4 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
SIPA1Q96FS4 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC20.25■□□□□ 0.83
SIPA1Q96FS4 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC20.25■□□□□ 0.83
SIPA1Q96FS4 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC20.25■□□□□ 0.83
SIPA1Q96FS4 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC20.25■□□□□ 0.83
SIPA1Q96FS4 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC20.25■□□□□ 0.83
SIPA1Q96FS4 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC20.25■□□□□ 0.83
SIPA1Q96FS4 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC20.25■□□□□ 0.83
SIPA1Q96FS4 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SIPA1Q96FS4 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC20.25■□□□□ 0.83
SIPA1Q96FS4 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC20.25■□□□□ 0.83
SIPA1Q96FS4 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC20.25■□□□□ 0.83
SIPA1Q96FS4 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC20.25■□□□□ 0.83
SIPA1Q96FS4 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC20.25■□□□□ 0.83
SIPA1Q96FS4 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
SIPA1Q96FS4 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SIPA1Q96FS4 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SIPA1Q96FS4 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SIPA1Q96FS4 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
SIPA1Q96FS4 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
SIPA1Q96FS4 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
SIPA1Q96FS4 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
SIPA1Q96FS4 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
SIPA1Q96FS4 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SIPA1Q96FS4 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC20.24■□□□□ 0.83
SIPA1Q96FS4 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SIPA1Q96FS4 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SIPA1Q96FS4 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
SIPA1Q96FS4 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC20.24■□□□□ 0.83
SIPA1Q96FS4 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
SIPA1Q96FS4 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SIPA1Q96FS4 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
SIPA1Q96FS4 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SIPA1Q96FS4 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SIPA1Q96FS4 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SIPA1Q96FS4 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC20.24■□□□□ 0.83
SIPA1Q96FS4 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SIPA1Q96FS4 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
SIPA1Q96FS4 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC20.23■□□□□ 0.83
SIPA1Q96FS4 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SIPA1Q96FS4 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 60.8 ms