Protein–RNA interactions for Protein: Q96A23

CPNE4, Copine-4, humanhuman

Predicted RBP Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4Q96A23 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
CPNE4Q96A23 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
CPNE4Q96A23 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC18.09■□□□□ 0.49
CPNE4Q96A23 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
CPNE4Q96A23 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC18.09■□□□□ 0.49
CPNE4Q96A23 ME2-216ENST00000639850 2331 ntTSL 5 BASIC18.09■□□□□ 0.49
CPNE4Q96A23 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
CPNE4Q96A23 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CPNE4Q96A23 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CPNE4Q96A23 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
CPNE4Q96A23 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC18.08■□□□□ 0.49
CPNE4Q96A23 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC18.08■□□□□ 0.49
CPNE4Q96A23 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
CPNE4Q96A23 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
CPNE4Q96A23 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
CPNE4Q96A23 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC18.08■□□□□ 0.49
CPNE4Q96A23 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
CPNE4Q96A23 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
CPNE4Q96A23 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC18.08■□□□□ 0.49
CPNE4Q96A23 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
CPNE4Q96A23 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CPNE4Q96A23 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC18.08■□□□□ 0.48
CPNE4Q96A23 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC18.08■□□□□ 0.48
CPNE4Q96A23 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC18.08■□□□□ 0.48
CPNE4Q96A23 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC18.08■□□□□ 0.48
CPNE4Q96A23 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC18.08■□□□□ 0.48
CPNE4Q96A23 INO80E-214ENST00000620599 515 ntTSL 2 BASIC18.08■□□□□ 0.48
CPNE4Q96A23 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CPNE4Q96A23 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
CPNE4Q96A23 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CPNE4Q96A23 AC092720.2-201ENST00000602388 1665 ntBASIC18.08■□□□□ 0.48
CPNE4Q96A23 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC18.07■□□□□ 0.48
CPNE4Q96A23 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC18.07■□□□□ 0.48
CPNE4Q96A23 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
CPNE4Q96A23 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CPNE4Q96A23 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC18.07■□□□□ 0.48
CPNE4Q96A23 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CPNE4Q96A23 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CPNE4Q96A23 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
CPNE4Q96A23 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
CPNE4Q96A23 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CPNE4Q96A23 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC18.07■□□□□ 0.48
CPNE4Q96A23 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC18.07■□□□□ 0.48
CPNE4Q96A23 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
CPNE4Q96A23 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CPNE4Q96A23 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CPNE4Q96A23 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC18.07■□□□□ 0.48
CPNE4Q96A23 AC092368.3-202ENST00000574180 1591 ntBASIC18.07■□□□□ 0.48
CPNE4Q96A23 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CPNE4Q96A23 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CPNE4Q96A23 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CPNE4Q96A23 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
CPNE4Q96A23 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CPNE4Q96A23 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
CPNE4Q96A23 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CPNE4Q96A23 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CPNE4Q96A23 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CPNE4Q96A23 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC18.06■□□□□ 0.48
CPNE4Q96A23 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC18.06■□□□□ 0.48
CPNE4Q96A23 TBCB-214ENST00000629269 413 ntTSL 5 BASIC18.06■□□□□ 0.48
CPNE4Q96A23 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
CPNE4Q96A23 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CPNE4Q96A23 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC18.06■□□□□ 0.48
CPNE4Q96A23 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CPNE4Q96A23 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
CPNE4Q96A23 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CPNE4Q96A23 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
CPNE4Q96A23 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CPNE4Q96A23 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
CPNE4Q96A23 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CPNE4Q96A23 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC18.05■□□□□ 0.48
CPNE4Q96A23 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CPNE4Q96A23 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC18.05■□□□□ 0.48
CPNE4Q96A23 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC18.05■□□□□ 0.48
CPNE4Q96A23 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CPNE4Q96A23 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
CPNE4Q96A23 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC18.05■□□□□ 0.48
CPNE4Q96A23 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CPNE4Q96A23 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC18.05■□□□□ 0.48
CPNE4Q96A23 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC18.05■□□□□ 0.48
CPNE4Q96A23 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC18.05■□□□□ 0.48
CPNE4Q96A23 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC18.05■□□□□ 0.48
CPNE4Q96A23 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC18.05■□□□□ 0.48
CPNE4Q96A23 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC18.05■□□□□ 0.48
CPNE4Q96A23 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC18.05■□□□□ 0.48
CPNE4Q96A23 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC18.05■□□□□ 0.48
CPNE4Q96A23 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
CPNE4Q96A23 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CPNE4Q96A23 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
CPNE4Q96A23 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CPNE4Q96A23 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
CPNE4Q96A23 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC18.05■□□□□ 0.48
CPNE4Q96A23 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
CPNE4Q96A23 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CPNE4Q96A23 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
CPNE4Q96A23 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CPNE4Q96A23 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CPNE4Q96A23 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
CPNE4Q96A23 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CPNE4Q96A23 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms