Protein–RNA interactions for Protein: Q93009

USP7, Ubiquitin carboxyl-terminal hydrolase 7, humanhuman

Predictions only

Length 1,102 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP7Q93009 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
USP7Q93009 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC19.89■□□□□ 0.77
USP7Q93009 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
USP7Q93009 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
USP7Q93009 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC19.89■□□□□ 0.77
USP7Q93009 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
USP7Q93009 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
USP7Q93009 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC19.89■□□□□ 0.77
USP7Q93009 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC19.89■□□□□ 0.77
USP7Q93009 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
USP7Q93009 AC142381.4-202ENST00000563973 229 ntBASIC19.89■□□□□ 0.77
USP7Q93009 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC19.89■□□□□ 0.77
USP7Q93009 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC19.89■□□□□ 0.77
USP7Q93009 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC19.89■□□□□ 0.77
USP7Q93009 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC19.89■□□□□ 0.77
USP7Q93009 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
USP7Q93009 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
USP7Q93009 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC19.88■□□□□ 0.77
USP7Q93009 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC19.88■□□□□ 0.77
USP7Q93009 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
USP7Q93009 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
USP7Q93009 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
USP7Q93009 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC19.88■□□□□ 0.77
USP7Q93009 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
USP7Q93009 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
USP7Q93009 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC19.88■□□□□ 0.77
USP7Q93009 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC19.88■□□□□ 0.77
USP7Q93009 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC19.88■□□□□ 0.77
USP7Q93009 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC19.88■□□□□ 0.77
USP7Q93009 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
USP7Q93009 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
USP7Q93009 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
USP7Q93009 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
USP7Q93009 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
USP7Q93009 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
USP7Q93009 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
USP7Q93009 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
USP7Q93009 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC19.87■□□□□ 0.77
USP7Q93009 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
USP7Q93009 AL355472.2-201ENST00000422958 438 ntBASIC19.87■□□□□ 0.77
USP7Q93009 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
USP7Q93009 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
USP7Q93009 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
USP7Q93009 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
USP7Q93009 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
USP7Q93009 FP700111.2-201ENST00000619190 1892 ntBASIC19.87■□□□□ 0.77
USP7Q93009 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC19.87■□□□□ 0.77
USP7Q93009 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
USP7Q93009 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
USP7Q93009 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC19.87■□□□□ 0.77
USP7Q93009 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
USP7Q93009 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
USP7Q93009 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
USP7Q93009 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC19.87■□□□□ 0.77
USP7Q93009 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC19.86■□□□□ 0.77
USP7Q93009 AC020907.5-201ENST00000624372 1936 ntBASIC19.86■□□□□ 0.77
USP7Q93009 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
USP7Q93009 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
USP7Q93009 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC19.86■□□□□ 0.77
USP7Q93009 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
USP7Q93009 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC19.86■□□□□ 0.77
USP7Q93009 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC19.86■□□□□ 0.77
USP7Q93009 AC026366.1-201ENST00000488803 879 ntBASIC19.86■□□□□ 0.77
USP7Q93009 UNC93B5-201ENST00000530315 699 ntBASIC19.86■□□□□ 0.77
USP7Q93009 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC19.86■□□□□ 0.77
USP7Q93009 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC19.86■□□□□ 0.77
USP7Q93009 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
USP7Q93009 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC19.86■□□□□ 0.77
USP7Q93009 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
USP7Q93009 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
USP7Q93009 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
USP7Q93009 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC19.86■□□□□ 0.77
USP7Q93009 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC19.86■□□□□ 0.77
USP7Q93009 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
USP7Q93009 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
USP7Q93009 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC19.86■□□□□ 0.77
USP7Q93009 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC19.86■□□□□ 0.77
USP7Q93009 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC19.86■□□□□ 0.77
USP7Q93009 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
USP7Q93009 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
USP7Q93009 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
USP7Q93009 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC19.85■□□□□ 0.77
USP7Q93009 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
USP7Q93009 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
USP7Q93009 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
USP7Q93009 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC19.85■□□□□ 0.77
USP7Q93009 AC245052.3-201ENST00000450182 901 ntBASIC19.85■□□□□ 0.77
USP7Q93009 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC19.85■□□□□ 0.77
USP7Q93009 CASP6-205ENST00000505486 538 ntTSL 4 BASIC19.85■□□□□ 0.77
USP7Q93009 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC19.85■□□□□ 0.77
USP7Q93009 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC19.85■□□□□ 0.77
USP7Q93009 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
USP7Q93009 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
USP7Q93009 KRT17P1-201ENST00000399211 1546 ntBASIC19.85■□□□□ 0.77
USP7Q93009 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
USP7Q93009 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC19.85■□□□□ 0.77
USP7Q93009 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
USP7Q93009 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
USP7Q93009 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
USP7Q93009 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC19.84■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms