Protein–RNA interactions for Protein: Q8WXD9

CASKIN1, Caskin-1, humanhuman

Predictions only

Length 1,431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASKIN1Q8WXD9 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC31.59■■■□□ 2.65
CASKIN1Q8WXD9 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC31.59■■■□□ 2.65
CASKIN1Q8WXD9 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC31.59■■■□□ 2.65
CASKIN1Q8WXD9 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC31.59■■■□□ 2.65
CASKIN1Q8WXD9 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC31.58■■■□□ 2.65
CASKIN1Q8WXD9 TSPY15P-201ENST00000457163 923 ntBASIC31.58■■■□□ 2.65
CASKIN1Q8WXD9 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC31.58■■■□□ 2.65
CASKIN1Q8WXD9 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC31.58■■■□□ 2.65
CASKIN1Q8WXD9 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC31.58■■■□□ 2.65
CASKIN1Q8WXD9 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC31.58■■■□□ 2.65
CASKIN1Q8WXD9 H19-201ENST00000411754 1788 ntTSL 5 BASIC31.58■■■□□ 2.65
CASKIN1Q8WXD9 ERF-202ENST00000440177 2032 ntTSL 2 BASIC31.58■■■□□ 2.65
CASKIN1Q8WXD9 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC31.58■■■□□ 2.65
CASKIN1Q8WXD9 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC31.58■■■□□ 2.65
CASKIN1Q8WXD9 NBPF21P-201ENST00000425093 1451 ntBASIC31.58■■■□□ 2.65
CASKIN1Q8WXD9 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC31.58■■■□□ 2.65
CASKIN1Q8WXD9 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC31.58■■■□□ 2.65
CASKIN1Q8WXD9 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC31.58■■■□□ 2.65
CASKIN1Q8WXD9 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC31.58■■■□□ 2.65
CASKIN1Q8WXD9 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC31.58■■■□□ 2.65
CASKIN1Q8WXD9 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC31.58■■■□□ 2.65
CASKIN1Q8WXD9 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC31.57■■■□□ 2.64
CASKIN1Q8WXD9 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC31.57■■■□□ 2.64
CASKIN1Q8WXD9 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC31.57■■■□□ 2.64
CASKIN1Q8WXD9 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC31.57■■■□□ 2.64
CASKIN1Q8WXD9 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC31.57■■■□□ 2.64
CASKIN1Q8WXD9 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC31.57■■■□□ 2.64
CASKIN1Q8WXD9 AF186192.3-201ENST00000583427 947 ntBASIC31.57■■■□□ 2.64
CASKIN1Q8WXD9 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC31.57■■■□□ 2.64
CASKIN1Q8WXD9 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC31.57■■■□□ 2.64
CASKIN1Q8WXD9 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC31.56■■■□□ 2.64
CASKIN1Q8WXD9 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC31.56■■■□□ 2.64
CASKIN1Q8WXD9 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC31.56■■■□□ 2.64
CASKIN1Q8WXD9 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC31.56■■■□□ 2.64
CASKIN1Q8WXD9 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC31.56■■■□□ 2.64
CASKIN1Q8WXD9 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC31.56■■■□□ 2.64
CASKIN1Q8WXD9 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC31.56■■■□□ 2.64
CASKIN1Q8WXD9 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC31.56■■■□□ 2.64
CASKIN1Q8WXD9 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC31.56■■■□□ 2.64
CASKIN1Q8WXD9 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC31.56■■■□□ 2.64
CASKIN1Q8WXD9 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC31.56■■■□□ 2.64
CASKIN1Q8WXD9 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC31.56■■■□□ 2.64
CASKIN1Q8WXD9 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC31.56■■■□□ 2.64
CASKIN1Q8WXD9 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC31.56■■■□□ 2.64
CASKIN1Q8WXD9 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC31.55■■■□□ 2.64
CASKIN1Q8WXD9 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC31.55■■■□□ 2.64
CASKIN1Q8WXD9 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC31.55■■■□□ 2.64
CASKIN1Q8WXD9 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC31.55■■■□□ 2.64
CASKIN1Q8WXD9 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC31.55■■■□□ 2.64
CASKIN1Q8WXD9 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC31.55■■■□□ 2.64
CASKIN1Q8WXD9 ECEL1P3-201ENST00000427961 737 ntBASIC31.55■■■□□ 2.64
CASKIN1Q8WXD9 F2R-202ENST00000505600 442 ntTSL 2 BASIC31.55■■■□□ 2.64
CASKIN1Q8WXD9 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC31.55■■■□□ 2.64
CASKIN1Q8WXD9 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC31.55■■■□□ 2.64
CASKIN1Q8WXD9 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC31.55■■■□□ 2.64
CASKIN1Q8WXD9 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC31.55■■■□□ 2.64
CASKIN1Q8WXD9 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC31.55■■■□□ 2.64
CASKIN1Q8WXD9 KRT17P2-201ENST00000300992 1314 ntBASIC31.55■■■□□ 2.64
CASKIN1Q8WXD9 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC31.55■■■□□ 2.64
CASKIN1Q8WXD9 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC31.55■■■□□ 2.64
CASKIN1Q8WXD9 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC31.54■■■□□ 2.64
CASKIN1Q8WXD9 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC31.54■■■□□ 2.64
CASKIN1Q8WXD9 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC31.54■■■□□ 2.64
CASKIN1Q8WXD9 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC31.54■■■□□ 2.64
CASKIN1Q8WXD9 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC31.54■■■□□ 2.64
CASKIN1Q8WXD9 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC31.54■■■□□ 2.64
CASKIN1Q8WXD9 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC31.54■■■□□ 2.64
CASKIN1Q8WXD9 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC31.54■■■□□ 2.64
CASKIN1Q8WXD9 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC31.54■■■□□ 2.64
CASKIN1Q8WXD9 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC31.54■■■□□ 2.64
CASKIN1Q8WXD9 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC31.54■■■□□ 2.64
CASKIN1Q8WXD9 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC31.54■■■□□ 2.64
CASKIN1Q8WXD9 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC31.54■■■□□ 2.64
CASKIN1Q8WXD9 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC31.54■■■□□ 2.64
CASKIN1Q8WXD9 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC31.54■■■□□ 2.64
CASKIN1Q8WXD9 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC31.54■■■□□ 2.64
CASKIN1Q8WXD9 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC31.53■■■□□ 2.64
CASKIN1Q8WXD9 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC31.53■■■□□ 2.64
CASKIN1Q8WXD9 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC31.53■■■□□ 2.64
CASKIN1Q8WXD9 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC31.53■■■□□ 2.64
CASKIN1Q8WXD9 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC31.53■■■□□ 2.64
CASKIN1Q8WXD9 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC31.53■■■□□ 2.64
CASKIN1Q8WXD9 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC31.53■■■□□ 2.64
CASKIN1Q8WXD9 STK25-234ENST00000535007 2459 ntTSL 2 BASIC31.52■■■□□ 2.64
CASKIN1Q8WXD9 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC31.52■■■□□ 2.64
CASKIN1Q8WXD9 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC31.52■■■□□ 2.64
CASKIN1Q8WXD9 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC31.52■■■□□ 2.64
CASKIN1Q8WXD9 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC31.52■■■□□ 2.64
CASKIN1Q8WXD9 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC31.52■■■□□ 2.64
CASKIN1Q8WXD9 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC31.52■■■□□ 2.64
CASKIN1Q8WXD9 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC31.51■■■□□ 2.64
CASKIN1Q8WXD9 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC31.51■■■□□ 2.64
CASKIN1Q8WXD9 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC31.51■■■□□ 2.64
CASKIN1Q8WXD9 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC31.51■■■□□ 2.64
CASKIN1Q8WXD9 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC31.51■■■□□ 2.64
CASKIN1Q8WXD9 PNN-205ENST00000556530 601 ntTSL 2 BASIC31.51■■■□□ 2.64
CASKIN1Q8WXD9 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC31.51■■■□□ 2.64
CASKIN1Q8WXD9 AC012306.2-201ENST00000609350 630 ntBASIC31.51■■■□□ 2.64
CASKIN1Q8WXD9 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC31.51■■■□□ 2.64
CASKIN1Q8WXD9 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC31.51■■■□□ 2.64
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms