Protein–RNA interactions for Protein: Q8TDI0

CHD5, Chromodomain-helicase-DNA-binding protein 5, humanhuman

Predictions only

Length 1,954 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD5Q8TDI0 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
CHD5Q8TDI0 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC20.48■□□□□ 0.87
CHD5Q8TDI0 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC20.48■□□□□ 0.87
CHD5Q8TDI0 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CHD5Q8TDI0 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC20.48■□□□□ 0.87
CHD5Q8TDI0 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC20.48■□□□□ 0.87
CHD5Q8TDI0 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CHD5Q8TDI0 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
CHD5Q8TDI0 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CHD5Q8TDI0 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
CHD5Q8TDI0 AC092667.1-201ENST00000434301 2586 ntBASIC20.47■□□□□ 0.87
CHD5Q8TDI0 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC20.47■□□□□ 0.87
CHD5Q8TDI0 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC20.47■□□□□ 0.87
CHD5Q8TDI0 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CHD5Q8TDI0 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CHD5Q8TDI0 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CHD5Q8TDI0 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
CHD5Q8TDI0 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CHD5Q8TDI0 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC20.47■□□□□ 0.87
CHD5Q8TDI0 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC20.47■□□□□ 0.87
CHD5Q8TDI0 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CHD5Q8TDI0 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
CHD5Q8TDI0 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CHD5Q8TDI0 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
CHD5Q8TDI0 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CHD5Q8TDI0 SMG8-203ENST00000578922 2178 ntBASIC20.47■□□□□ 0.87
CHD5Q8TDI0 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC20.47■□□□□ 0.87
CHD5Q8TDI0 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC20.47■□□□□ 0.87
CHD5Q8TDI0 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC20.47■□□□□ 0.87
CHD5Q8TDI0 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CHD5Q8TDI0 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC20.46■□□□□ 0.87
CHD5Q8TDI0 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
CHD5Q8TDI0 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CHD5Q8TDI0 SOX15-203ENST00000570788 1093 ntBASIC20.46■□□□□ 0.87
CHD5Q8TDI0 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CHD5Q8TDI0 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CHD5Q8TDI0 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC20.46■□□□□ 0.87
CHD5Q8TDI0 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
CHD5Q8TDI0 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CHD5Q8TDI0 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC20.46■□□□□ 0.87
CHD5Q8TDI0 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
CHD5Q8TDI0 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC20.46■□□□□ 0.87
CHD5Q8TDI0 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
CHD5Q8TDI0 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.87
CHD5Q8TDI0 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
CHD5Q8TDI0 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
CHD5Q8TDI0 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC20.45■□□□□ 0.86
CHD5Q8TDI0 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
CHD5Q8TDI0 MFF-205ENST00000354503 1085 ntTSL 2 BASIC20.45■□□□□ 0.86
CHD5Q8TDI0 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CHD5Q8TDI0 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
CHD5Q8TDI0 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC20.45■□□□□ 0.86
CHD5Q8TDI0 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC20.45■□□□□ 0.86
CHD5Q8TDI0 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
CHD5Q8TDI0 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
CHD5Q8TDI0 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CHD5Q8TDI0 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CHD5Q8TDI0 LINC01006-201ENST00000333319 2292 ntBASIC20.45■□□□□ 0.86
CHD5Q8TDI0 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
CHD5Q8TDI0 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC20.45■□□□□ 0.86
CHD5Q8TDI0 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CHD5Q8TDI0 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC20.45■□□□□ 0.86
CHD5Q8TDI0 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC20.45■□□□□ 0.86
CHD5Q8TDI0 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC20.45■□□□□ 0.86
CHD5Q8TDI0 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CHD5Q8TDI0 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC20.45■□□□□ 0.86
CHD5Q8TDI0 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
CHD5Q8TDI0 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
CHD5Q8TDI0 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC20.45■□□□□ 0.86
CHD5Q8TDI0 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
CHD5Q8TDI0 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
CHD5Q8TDI0 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CHD5Q8TDI0 KRT8P20-201ENST00000423953 1409 ntBASIC20.44■□□□□ 0.86
CHD5Q8TDI0 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC20.44■□□□□ 0.86
CHD5Q8TDI0 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC20.44■□□□□ 0.86
CHD5Q8TDI0 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CHD5Q8TDI0 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
CHD5Q8TDI0 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC20.44■□□□□ 0.86
CHD5Q8TDI0 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
CHD5Q8TDI0 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
CHD5Q8TDI0 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
CHD5Q8TDI0 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
CHD5Q8TDI0 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC20.44■□□□□ 0.86
CHD5Q8TDI0 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
CHD5Q8TDI0 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC20.44■□□□□ 0.86
CHD5Q8TDI0 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC20.44■□□□□ 0.86
CHD5Q8TDI0 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
CHD5Q8TDI0 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
CHD5Q8TDI0 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CHD5Q8TDI0 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC20.44■□□□□ 0.86
CHD5Q8TDI0 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CHD5Q8TDI0 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
CHD5Q8TDI0 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
CHD5Q8TDI0 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CHD5Q8TDI0 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
CHD5Q8TDI0 KRT8P17-201ENST00000453110 1448 ntBASIC20.44■□□□□ 0.86
CHD5Q8TDI0 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC20.44■□□□□ 0.86
CHD5Q8TDI0 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CHD5Q8TDI0 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC20.43■□□□□ 0.86
CHD5Q8TDI0 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms