Protein–RNA interactions for Protein: Q8TAP4

LMO3, LIM domain only protein 3, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3Q8TAP4 AFG3L1P-217ENST00000557444 2447 ntBASIC21.69■■□□□ 1.06
LMO3Q8TAP4 MKRN4P-201ENST00000444706 1521 ntBASIC21.69■■□□□ 1.06
LMO3Q8TAP4 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
LMO3Q8TAP4 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
LMO3Q8TAP4 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC21.69■■□□□ 1.06
LMO3Q8TAP4 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
LMO3Q8TAP4 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC21.68■■□□□ 1.06
LMO3Q8TAP4 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC21.68■■□□□ 1.06
LMO3Q8TAP4 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
LMO3Q8TAP4 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
LMO3Q8TAP4 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
LMO3Q8TAP4 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
LMO3Q8TAP4 MAP2K4P1-201ENST00000438453 1195 ntBASIC21.68■■□□□ 1.06
LMO3Q8TAP4 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC21.68■■□□□ 1.06
LMO3Q8TAP4 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC21.68■■□□□ 1.06
LMO3Q8TAP4 AC083906.2-201ENST00000511578 360 ntBASIC21.68■■□□□ 1.06
LMO3Q8TAP4 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC21.68■■□□□ 1.06
LMO3Q8TAP4 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC21.68■■□□□ 1.06
LMO3Q8TAP4 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC21.68■■□□□ 1.06
LMO3Q8TAP4 ISCU-212ENST00000547005 795 ntTSL 3 BASIC21.68■■□□□ 1.06
LMO3Q8TAP4 C2orf69P4-201ENST00000565394 541 ntBASIC21.68■■□□□ 1.06
LMO3Q8TAP4 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
LMO3Q8TAP4 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC21.68■■□□□ 1.06
LMO3Q8TAP4 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
LMO3Q8TAP4 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC21.68■■□□□ 1.06
LMO3Q8TAP4 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
LMO3Q8TAP4 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC21.68■■□□□ 1.06
LMO3Q8TAP4 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
LMO3Q8TAP4 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC21.67■■□□□ 1.06
LMO3Q8TAP4 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC21.67■■□□□ 1.06
LMO3Q8TAP4 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC21.67■■□□□ 1.06
LMO3Q8TAP4 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
LMO3Q8TAP4 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
LMO3Q8TAP4 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC21.67■■□□□ 1.06
LMO3Q8TAP4 NCF1B-203ENST00000435988 1254 ntBASIC21.67■■□□□ 1.06
LMO3Q8TAP4 PHB2-213ENST00000546111 858 ntTSL 2 BASIC21.67■■□□□ 1.06
LMO3Q8TAP4 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC21.67■■□□□ 1.06
LMO3Q8TAP4 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC21.67■■□□□ 1.06
LMO3Q8TAP4 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
LMO3Q8TAP4 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC21.67■■□□□ 1.06
LMO3Q8TAP4 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
LMO3Q8TAP4 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
LMO3Q8TAP4 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
LMO3Q8TAP4 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
LMO3Q8TAP4 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
LMO3Q8TAP4 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC21.66■■□□□ 1.06
LMO3Q8TAP4 AL121832.2-201ENST00000610979 668 ntBASIC21.66■■□□□ 1.06
LMO3Q8TAP4 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
LMO3Q8TAP4 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
LMO3Q8TAP4 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC21.66■■□□□ 1.06
LMO3Q8TAP4 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
LMO3Q8TAP4 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC21.66■■□□□ 1.06
LMO3Q8TAP4 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
LMO3Q8TAP4 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC21.65■■□□□ 1.06
LMO3Q8TAP4 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
LMO3Q8TAP4 BID-204ENST00000399767 2129 ntTSL 2 BASIC21.65■■□□□ 1.06
LMO3Q8TAP4 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC21.65■■□□□ 1.06
LMO3Q8TAP4 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC21.65■■□□□ 1.06
LMO3Q8TAP4 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC21.65■■□□□ 1.06
LMO3Q8TAP4 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
LMO3Q8TAP4 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC21.65■■□□□ 1.06
LMO3Q8TAP4 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC21.65■■□□□ 1.06
LMO3Q8TAP4 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC21.65■■□□□ 1.06
LMO3Q8TAP4 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC21.65■■□□□ 1.06
LMO3Q8TAP4 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
LMO3Q8TAP4 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
LMO3Q8TAP4 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
LMO3Q8TAP4 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
LMO3Q8TAP4 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC21.65■■□□□ 1.06
LMO3Q8TAP4 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC21.65■■□□□ 1.06
LMO3Q8TAP4 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
LMO3Q8TAP4 KRT8P17-201ENST00000453110 1448 ntBASIC21.64■■□□□ 1.06
LMO3Q8TAP4 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
LMO3Q8TAP4 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
LMO3Q8TAP4 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
LMO3Q8TAP4 CD37-204ENST00000535669 1674 ntTSL 2 BASIC21.64■■□□□ 1.05
LMO3Q8TAP4 MIPEPP3-201ENST00000412105 444 ntBASIC21.64■■□□□ 1.05
LMO3Q8TAP4 BX276092.2-201ENST00000417668 665 ntBASIC21.64■■□□□ 1.05
LMO3Q8TAP4 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC21.64■■□□□ 1.05
LMO3Q8TAP4 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC21.64■■□□□ 1.05
LMO3Q8TAP4 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC21.64■■□□□ 1.05
LMO3Q8TAP4 BRWD1-AS2-201ENST00000603064 1028 ntBASIC21.64■■□□□ 1.05
LMO3Q8TAP4 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
LMO3Q8TAP4 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
LMO3Q8TAP4 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
LMO3Q8TAP4 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
LMO3Q8TAP4 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
LMO3Q8TAP4 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC21.63■■□□□ 1.05
LMO3Q8TAP4 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
LMO3Q8TAP4 NXN-202ENST00000537628 1340 ntTSL 3 BASIC21.63■■□□□ 1.05
LMO3Q8TAP4 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
LMO3Q8TAP4 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
LMO3Q8TAP4 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC21.63■■□□□ 1.05
LMO3Q8TAP4 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
LMO3Q8TAP4 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC21.63■■□□□ 1.05
LMO3Q8TAP4 AC006970.2-201ENST00000450065 779 ntBASIC21.63■■□□□ 1.05
LMO3Q8TAP4 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC21.63■■□□□ 1.05
LMO3Q8TAP4 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
LMO3Q8TAP4 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
LMO3Q8TAP4 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC21.63■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms