Protein–RNA interactions for Protein: Q8NHY2

RFWD2, E3 ubiquitin-protein ligase RFWD2, humanhuman

Predictions only

Length 731 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD2Q8NHY2 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
RFWD2Q8NHY2 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
RFWD2Q8NHY2 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
RFWD2Q8NHY2 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
RFWD2Q8NHY2 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
RFWD2Q8NHY2 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
RFWD2Q8NHY2 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC19.9■□□□□ 0.78
RFWD2Q8NHY2 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
RFWD2Q8NHY2 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC19.9■□□□□ 0.78
RFWD2Q8NHY2 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
RFWD2Q8NHY2 EEF1DP3-203ENST00000566025 782 ntBASIC19.9■□□□□ 0.78
RFWD2Q8NHY2 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC19.9■□□□□ 0.78
RFWD2Q8NHY2 AC008764.7-201ENST00000593779 1081 ntBASIC19.9■□□□□ 0.78
RFWD2Q8NHY2 MIR2861-201ENST00000636310 90 ntBASIC19.9■□□□□ 0.78
RFWD2Q8NHY2 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
RFWD2Q8NHY2 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC19.9■□□□□ 0.78
RFWD2Q8NHY2 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
RFWD2Q8NHY2 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
RFWD2Q8NHY2 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
RFWD2Q8NHY2 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC19.9■□□□□ 0.78
RFWD2Q8NHY2 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
RFWD2Q8NHY2 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
RFWD2Q8NHY2 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
RFWD2Q8NHY2 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
RFWD2Q8NHY2 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC19.89■□□□□ 0.78
RFWD2Q8NHY2 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
RFWD2Q8NHY2 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
RFWD2Q8NHY2 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
RFWD2Q8NHY2 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
RFWD2Q8NHY2 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
RFWD2Q8NHY2 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
RFWD2Q8NHY2 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
RFWD2Q8NHY2 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
RFWD2Q8NHY2 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC19.89■□□□□ 0.77
RFWD2Q8NHY2 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC19.89■□□□□ 0.77
RFWD2Q8NHY2 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC19.89■□□□□ 0.77
RFWD2Q8NHY2 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
RFWD2Q8NHY2 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC19.89■□□□□ 0.77
RFWD2Q8NHY2 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
RFWD2Q8NHY2 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
RFWD2Q8NHY2 GRAMD4P4-201ENST00000613563 1115 ntBASIC19.89■□□□□ 0.77
RFWD2Q8NHY2 TMEM179-206ENST00000616017 1645 ntBASIC19.89■□□□□ 0.77
RFWD2Q8NHY2 AC106739.1-201ENST00000617035 715 ntBASIC19.89■□□□□ 0.77
RFWD2Q8NHY2 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC19.89■□□□□ 0.77
RFWD2Q8NHY2 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
RFWD2Q8NHY2 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
RFWD2Q8NHY2 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
RFWD2Q8NHY2 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
RFWD2Q8NHY2 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
RFWD2Q8NHY2 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC19.88■□□□□ 0.77
RFWD2Q8NHY2 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC19.88■□□□□ 0.77
RFWD2Q8NHY2 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
RFWD2Q8NHY2 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC19.88■□□□□ 0.77
RFWD2Q8NHY2 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
RFWD2Q8NHY2 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC19.88■□□□□ 0.77
RFWD2Q8NHY2 AC126544.1-201ENST00000580842 1059 ntBASIC19.88■□□□□ 0.77
RFWD2Q8NHY2 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC19.88■□□□□ 0.77
RFWD2Q8NHY2 AC053503.5-201ENST00000601508 636 ntBASIC19.88■□□□□ 0.77
RFWD2Q8NHY2 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC19.88■□□□□ 0.77
RFWD2Q8NHY2 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC19.88■□□□□ 0.77
RFWD2Q8NHY2 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
RFWD2Q8NHY2 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC19.88■□□□□ 0.77
RFWD2Q8NHY2 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
RFWD2Q8NHY2 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
RFWD2Q8NHY2 TREX1-205ENST00000625293 1783 ntBASIC19.88■□□□□ 0.77
RFWD2Q8NHY2 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
RFWD2Q8NHY2 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC19.87■□□□□ 0.77
RFWD2Q8NHY2 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
RFWD2Q8NHY2 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
RFWD2Q8NHY2 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC19.87■□□□□ 0.77
RFWD2Q8NHY2 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
RFWD2Q8NHY2 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
RFWD2Q8NHY2 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC19.87■□□□□ 0.77
RFWD2Q8NHY2 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
RFWD2Q8NHY2 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
RFWD2Q8NHY2 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
RFWD2Q8NHY2 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
RFWD2Q8NHY2 BX842568.3-201ENST00000418104 571 ntBASIC19.87■□□□□ 0.77
RFWD2Q8NHY2 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
RFWD2Q8NHY2 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
RFWD2Q8NHY2 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
RFWD2Q8NHY2 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
RFWD2Q8NHY2 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
RFWD2Q8NHY2 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
RFWD2Q8NHY2 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
RFWD2Q8NHY2 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
RFWD2Q8NHY2 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC19.87■□□□□ 0.77
RFWD2Q8NHY2 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC19.87■□□□□ 0.77
RFWD2Q8NHY2 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
RFWD2Q8NHY2 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
RFWD2Q8NHY2 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
RFWD2Q8NHY2 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC19.86■□□□□ 0.77
RFWD2Q8NHY2 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RFWD2Q8NHY2 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
RFWD2Q8NHY2 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
RFWD2Q8NHY2 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC19.86■□□□□ 0.77
RFWD2Q8NHY2 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RFWD2Q8NHY2 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC19.86■□□□□ 0.77
RFWD2Q8NHY2 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
RFWD2Q8NHY2 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC19.86■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms