Protein–RNA interactions for Protein: Q8NDZ2

SIMC1, SUMO-interacting motif-containing protein 1, humanhuman

Predictions only

Length 872 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIMC1Q8NDZ2 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SIMC1Q8NDZ2 KRT17P1-201ENST00000399211 1546 ntBASIC18.98■□□□□ 0.63
SIMC1Q8NDZ2 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
SIMC1Q8NDZ2 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
SIMC1Q8NDZ2 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SIMC1Q8NDZ2 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
SIMC1Q8NDZ2 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
SIMC1Q8NDZ2 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
SIMC1Q8NDZ2 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SIMC1Q8NDZ2 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
SIMC1Q8NDZ2 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SIMC1Q8NDZ2 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
SIMC1Q8NDZ2 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
SIMC1Q8NDZ2 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
SIMC1Q8NDZ2 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
SIMC1Q8NDZ2 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SIMC1Q8NDZ2 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SIMC1Q8NDZ2 MCRIP2P1-201ENST00000394346 511 ntBASIC18.97■□□□□ 0.63
SIMC1Q8NDZ2 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SIMC1Q8NDZ2 PHB2-213ENST00000546111 858 ntTSL 2 BASIC18.97■□□□□ 0.63
SIMC1Q8NDZ2 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC18.97■□□□□ 0.63
SIMC1Q8NDZ2 GXYLT1P5-201ENST00000614548 1189 ntBASIC18.97■□□□□ 0.63
SIMC1Q8NDZ2 AL356652.1-201ENST00000615962 565 ntBASIC18.97■□□□□ 0.63
SIMC1Q8NDZ2 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC18.97■□□□□ 0.63
SIMC1Q8NDZ2 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SIMC1Q8NDZ2 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
SIMC1Q8NDZ2 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
SIMC1Q8NDZ2 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SIMC1Q8NDZ2 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
SIMC1Q8NDZ2 AC112907.3-201ENST00000577781 2400 ntBASIC18.96■□□□□ 0.63
SIMC1Q8NDZ2 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
SIMC1Q8NDZ2 SMG8-203ENST00000578922 2178 ntBASIC18.96■□□□□ 0.63
SIMC1Q8NDZ2 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC18.96■□□□□ 0.63
SIMC1Q8NDZ2 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC18.96■□□□□ 0.63
SIMC1Q8NDZ2 GCK-205ENST00000437084 1385 ntTSL 5 BASIC18.96■□□□□ 0.63
SIMC1Q8NDZ2 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SIMC1Q8NDZ2 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
SIMC1Q8NDZ2 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SIMC1Q8NDZ2 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SIMC1Q8NDZ2 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
SIMC1Q8NDZ2 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC18.96■□□□□ 0.63
SIMC1Q8NDZ2 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC18.96■□□□□ 0.63
SIMC1Q8NDZ2 GUSBP6-202ENST00000438529 1198 ntBASIC18.96■□□□□ 0.63
SIMC1Q8NDZ2 AC083906.2-201ENST00000511578 360 ntBASIC18.96■□□□□ 0.63
SIMC1Q8NDZ2 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC18.96■□□□□ 0.63
SIMC1Q8NDZ2 AF201337.1-201ENST00000520239 748 ntBASIC18.96■□□□□ 0.63
SIMC1Q8NDZ2 TK2-208ENST00000545043 1120 ntTSL 2 BASIC18.96■□□□□ 0.63
SIMC1Q8NDZ2 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC18.96■□□□□ 0.63
SIMC1Q8NDZ2 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC18.96■□□□□ 0.63
SIMC1Q8NDZ2 CYP2T3P-201ENST00000601990 817 ntBASIC18.96■□□□□ 0.63
SIMC1Q8NDZ2 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
SIMC1Q8NDZ2 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SIMC1Q8NDZ2 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
SIMC1Q8NDZ2 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
SIMC1Q8NDZ2 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SIMC1Q8NDZ2 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SIMC1Q8NDZ2 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
SIMC1Q8NDZ2 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
SIMC1Q8NDZ2 EML3-217ENST00000531557 2509 ntTSL 5 BASIC18.96■□□□□ 0.63
SIMC1Q8NDZ2 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
SIMC1Q8NDZ2 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SIMC1Q8NDZ2 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SIMC1Q8NDZ2 AC092720.2-201ENST00000602388 1665 ntBASIC18.95■□□□□ 0.62
SIMC1Q8NDZ2 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SIMC1Q8NDZ2 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC18.95■□□□□ 0.62
SIMC1Q8NDZ2 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SIMC1Q8NDZ2 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC18.95■□□□□ 0.62
SIMC1Q8NDZ2 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC18.95■□□□□ 0.62
SIMC1Q8NDZ2 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC18.95■□□□□ 0.62
SIMC1Q8NDZ2 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
SIMC1Q8NDZ2 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC18.95■□□□□ 0.62
SIMC1Q8NDZ2 NCF1B-203ENST00000435988 1254 ntBASIC18.95■□□□□ 0.62
SIMC1Q8NDZ2 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
SIMC1Q8NDZ2 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
SIMC1Q8NDZ2 OAS3-207ENST00000551007 998 ntTSL 2 BASIC18.95■□□□□ 0.62
SIMC1Q8NDZ2 AC100791.3-201ENST00000617619 330 ntBASIC18.95■□□□□ 0.62
SIMC1Q8NDZ2 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
SIMC1Q8NDZ2 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC18.95■□□□□ 0.62
SIMC1Q8NDZ2 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
SIMC1Q8NDZ2 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SIMC1Q8NDZ2 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC18.95■□□□□ 0.62
SIMC1Q8NDZ2 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SIMC1Q8NDZ2 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
SIMC1Q8NDZ2 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC18.94■□□□□ 0.62
SIMC1Q8NDZ2 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
SIMC1Q8NDZ2 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
SIMC1Q8NDZ2 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
SIMC1Q8NDZ2 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SIMC1Q8NDZ2 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC18.94■□□□□ 0.62
SIMC1Q8NDZ2 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
SIMC1Q8NDZ2 AL512625.2-201ENST00000417533 625 ntBASIC18.94■□□□□ 0.62
SIMC1Q8NDZ2 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC18.94■□□□□ 0.62
SIMC1Q8NDZ2 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
SIMC1Q8NDZ2 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
SIMC1Q8NDZ2 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC18.94■□□□□ 0.62
SIMC1Q8NDZ2 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SIMC1Q8NDZ2 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC18.94■□□□□ 0.62
SIMC1Q8NDZ2 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SIMC1Q8NDZ2 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC18.94■□□□□ 0.62
SIMC1Q8NDZ2 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC18.94■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 18.8 ms