Protein–RNA interactions for Protein: Q8N967

LRTM2, Leucine-rich repeat and transmembrane domain-containing protein 2, humanhuman

Predictions only

Length 370 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM2Q8N967 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
LRTM2Q8N967 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
LRTM2Q8N967 AL035685.1-201ENST00000636663 812 ntBASIC16.46■□□□□ 0.23
LRTM2Q8N967 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC16.46■□□□□ 0.23
LRTM2Q8N967 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
LRTM2Q8N967 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
LRTM2Q8N967 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
LRTM2Q8N967 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC16.46■□□□□ 0.22
LRTM2Q8N967 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
LRTM2Q8N967 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
LRTM2Q8N967 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
LRTM2Q8N967 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
LRTM2Q8N967 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
LRTM2Q8N967 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC16.45■□□□□ 0.22
LRTM2Q8N967 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
LRTM2Q8N967 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC16.45■□□□□ 0.22
LRTM2Q8N967 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC16.45■□□□□ 0.22
LRTM2Q8N967 PTGES2-AS1-201ENST00000443493 2100 ntBASIC16.45■□□□□ 0.22
LRTM2Q8N967 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC16.45■□□□□ 0.22
LRTM2Q8N967 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC16.45■□□□□ 0.22
LRTM2Q8N967 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
LRTM2Q8N967 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC16.45■□□□□ 0.22
LRTM2Q8N967 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC16.45■□□□□ 0.22
LRTM2Q8N967 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC16.45■□□□□ 0.22
LRTM2Q8N967 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC16.45■□□□□ 0.22
LRTM2Q8N967 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
LRTM2Q8N967 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
LRTM2Q8N967 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
LRTM2Q8N967 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
LRTM2Q8N967 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
LRTM2Q8N967 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC16.45■□□□□ 0.22
LRTM2Q8N967 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
LRTM2Q8N967 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
LRTM2Q8N967 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
LRTM2Q8N967 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC16.44■□□□□ 0.22
LRTM2Q8N967 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
LRTM2Q8N967 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
LRTM2Q8N967 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC16.44■□□□□ 0.22
LRTM2Q8N967 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC16.44■□□□□ 0.22
LRTM2Q8N967 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC16.44■□□□□ 0.22
LRTM2Q8N967 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
LRTM2Q8N967 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC16.44■□□□□ 0.22
LRTM2Q8N967 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
LRTM2Q8N967 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
LRTM2Q8N967 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
LRTM2Q8N967 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC16.44■□□□□ 0.22
LRTM2Q8N967 PWWP2AP1-201ENST00000429776 2273 ntBASIC16.44■□□□□ 0.22
LRTM2Q8N967 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
LRTM2Q8N967 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
LRTM2Q8N967 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
LRTM2Q8N967 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC16.44■□□□□ 0.22
LRTM2Q8N967 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
LRTM2Q8N967 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
LRTM2Q8N967 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
LRTM2Q8N967 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
LRTM2Q8N967 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC16.44■□□□□ 0.22
LRTM2Q8N967 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
LRTM2Q8N967 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC16.43■□□□□ 0.22
LRTM2Q8N967 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC16.43■□□□□ 0.22
LRTM2Q8N967 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
LRTM2Q8N967 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
LRTM2Q8N967 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
LRTM2Q8N967 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
LRTM2Q8N967 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC16.43■□□□□ 0.22
LRTM2Q8N967 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
LRTM2Q8N967 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC16.43■□□□□ 0.22
LRTM2Q8N967 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC16.43■□□□□ 0.22
LRTM2Q8N967 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
LRTM2Q8N967 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
LRTM2Q8N967 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
LRTM2Q8N967 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC16.43■□□□□ 0.22
LRTM2Q8N967 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
LRTM2Q8N967 MIR572-201ENST00000384983 95 ntBASIC16.43■□□□□ 0.22
LRTM2Q8N967 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
LRTM2Q8N967 AC131281.2-201ENST00000520478 145 ntBASIC16.43■□□□□ 0.22
LRTM2Q8N967 AC138907.5-202ENST00000569484 235 ntBASIC16.43■□□□□ 0.22
LRTM2Q8N967 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
LRTM2Q8N967 AC120498.10-201ENST00000621827 505 ntBASIC16.43■□□□□ 0.22
LRTM2Q8N967 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
LRTM2Q8N967 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC16.43■□□□□ 0.22
LRTM2Q8N967 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
LRTM2Q8N967 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
LRTM2Q8N967 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC16.43■□□□□ 0.22
LRTM2Q8N967 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC16.43■□□□□ 0.22
LRTM2Q8N967 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
LRTM2Q8N967 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC16.43■□□□□ 0.22
LRTM2Q8N967 TSPY26P-201ENST00000476365 1326 ntBASIC16.43■□□□□ 0.22
LRTM2Q8N967 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC16.43■□□□□ 0.22
LRTM2Q8N967 AC009237.14-201ENST00000609975 1594 ntBASIC16.43■□□□□ 0.22
LRTM2Q8N967 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
LRTM2Q8N967 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
LRTM2Q8N967 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC16.42■□□□□ 0.22
LRTM2Q8N967 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
LRTM2Q8N967 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
LRTM2Q8N967 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
LRTM2Q8N967 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
LRTM2Q8N967 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC16.42■□□□□ 0.22
LRTM2Q8N967 GOLGA2P11-201ENST00000562660 1621 ntBASIC16.42■□□□□ 0.22
LRTM2Q8N967 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC16.42■□□□□ 0.22
LRTM2Q8N967 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms