Protein–RNA interactions for Protein: Q8N139

ABCA6, ATP-binding cassette sub-family A member 6, humanhuman

Predictions only

Length 1,617 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA6Q8N139 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC30.16■■■□□ 2.42
ABCA6Q8N139 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC30.16■■■□□ 2.42
ABCA6Q8N139 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC30.16■■■□□ 2.42
ABCA6Q8N139 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC30.16■■■□□ 2.42
ABCA6Q8N139 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC30.16■■■□□ 2.42
ABCA6Q8N139 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC30.15■■■□□ 2.42
ABCA6Q8N139 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC30.15■■■□□ 2.42
ABCA6Q8N139 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC30.15■■■□□ 2.42
ABCA6Q8N139 CR392000.1-201ENST00000624770 1228 ntBASIC30.15■■■□□ 2.42
ABCA6Q8N139 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC30.15■■■□□ 2.42
ABCA6Q8N139 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC30.15■■■□□ 2.42
ABCA6Q8N139 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC30.15■■■□□ 2.42
ABCA6Q8N139 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC30.15■■■□□ 2.42
ABCA6Q8N139 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC30.15■■■□□ 2.42
ABCA6Q8N139 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC30.14■■■□□ 2.42
ABCA6Q8N139 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC30.14■■■□□ 2.42
ABCA6Q8N139 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC30.14■■■□□ 2.42
ABCA6Q8N139 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC30.14■■■□□ 2.42
ABCA6Q8N139 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC30.14■■■□□ 2.42
ABCA6Q8N139 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC30.14■■■□□ 2.42
ABCA6Q8N139 NMU-205ENST00000511469 756 ntTSL 3 BASIC30.14■■■□□ 2.42
ABCA6Q8N139 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC30.14■■■□□ 2.42
ABCA6Q8N139 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC30.14■■■□□ 2.42
ABCA6Q8N139 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC30.14■■■□□ 2.42
ABCA6Q8N139 MIR2861-201ENST00000636310 90 ntBASIC30.14■■■□□ 2.42
ABCA6Q8N139 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC30.14■■■□□ 2.42
ABCA6Q8N139 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC30.14■■■□□ 2.42
ABCA6Q8N139 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC30.14■■■□□ 2.42
ABCA6Q8N139 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC30.14■■■□□ 2.41
ABCA6Q8N139 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC30.14■■■□□ 2.41
ABCA6Q8N139 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC30.14■■■□□ 2.41
ABCA6Q8N139 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC30.14■■■□□ 2.41
ABCA6Q8N139 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC30.14■■■□□ 2.41
ABCA6Q8N139 KRT8P36-201ENST00000489121 1440 ntBASIC30.13■■■□□ 2.41
ABCA6Q8N139 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC30.13■■■□□ 2.41
ABCA6Q8N139 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC30.13■■■□□ 2.41
ABCA6Q8N139 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC30.13■■■□□ 2.41
ABCA6Q8N139 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC30.13■■■□□ 2.41
ABCA6Q8N139 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC30.13■■■□□ 2.41
ABCA6Q8N139 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC30.13■■■□□ 2.41
ABCA6Q8N139 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC30.13■■■□□ 2.41
ABCA6Q8N139 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC30.13■■■□□ 2.41
ABCA6Q8N139 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC30.12■■■□□ 2.41
ABCA6Q8N139 CRYGFP-201ENST00000418459 633 ntBASIC30.12■■■□□ 2.41
ABCA6Q8N139 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC30.12■■■□□ 2.41
ABCA6Q8N139 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC30.12■■■□□ 2.41
ABCA6Q8N139 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC30.12■■■□□ 2.41
ABCA6Q8N139 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC30.12■■■□□ 2.41
ABCA6Q8N139 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC30.12■■■□□ 2.41
ABCA6Q8N139 ME2-206ENST00000638410 2289 ntTSL 5 BASIC30.12■■■□□ 2.41
ABCA6Q8N139 ME2-210ENST00000639255 2262 ntTSL 5 BASIC30.12■■■□□ 2.41
ABCA6Q8N139 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC30.12■■■□□ 2.41
ABCA6Q8N139 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC30.12■■■□□ 2.41
ABCA6Q8N139 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC30.11■■■□□ 2.41
ABCA6Q8N139 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC30.11■■■□□ 2.41
ABCA6Q8N139 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC30.11■■■□□ 2.41
ABCA6Q8N139 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC30.11■■■□□ 2.41
ABCA6Q8N139 C2orf69P3-201ENST00000565542 1120 ntBASIC30.11■■■□□ 2.41
ABCA6Q8N139 ABBA01031674.1-201ENST00000635145 728 ntBASIC30.11■■■□□ 2.41
ABCA6Q8N139 LGALS8-AS1-201ENST00000487567 1457 ntBASIC30.11■■■□□ 2.41
ABCA6Q8N139 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC30.11■■■□□ 2.41
ABCA6Q8N139 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC30.11■■■□□ 2.41
ABCA6Q8N139 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC30.11■■■□□ 2.41
ABCA6Q8N139 GUK1-204ENST00000366721 689 ntTSL 3 BASIC30.11■■■□□ 2.41
ABCA6Q8N139 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC30.11■■■□□ 2.41
ABCA6Q8N139 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC30.11■■■□□ 2.41
ABCA6Q8N139 DGCR10-201ENST00000609839 495 ntBASIC30.11■■■□□ 2.41
ABCA6Q8N139 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC30.1■■■□□ 2.41
ABCA6Q8N139 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC30.1■■■□□ 2.41
ABCA6Q8N139 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC30.1■■■□□ 2.41
ABCA6Q8N139 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC30.1■■■□□ 2.41
ABCA6Q8N139 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC30.1■■■□□ 2.41
ABCA6Q8N139 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC30.1■■■□□ 2.41
ABCA6Q8N139 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC30.1■■■□□ 2.41
ABCA6Q8N139 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC30.1■■■□□ 2.41
ABCA6Q8N139 AP005242.2-201ENST00000580065 1175 ntBASIC30.1■■■□□ 2.41
ABCA6Q8N139 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC30.1■■■□□ 2.41
ABCA6Q8N139 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC30.1■■■□□ 2.41
ABCA6Q8N139 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC30.1■■■□□ 2.41
ABCA6Q8N139 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC30.1■■■□□ 2.41
ABCA6Q8N139 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC30.1■■■□□ 2.41
ABCA6Q8N139 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC30.1■■■□□ 2.41
ABCA6Q8N139 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC30.09■■■□□ 2.41
ABCA6Q8N139 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC30.09■■■□□ 2.41
ABCA6Q8N139 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC30.09■■■□□ 2.41
ABCA6Q8N139 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC30.09■■■□□ 2.41
ABCA6Q8N139 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC30.09■■■□□ 2.41
ABCA6Q8N139 AL121894.2-201ENST00000602977 491 ntBASIC30.09■■■□□ 2.41
ABCA6Q8N139 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC30.09■■■□□ 2.41
ABCA6Q8N139 CLN6-221ENST00000637494 765 ntTSL 5 BASIC30.09■■■□□ 2.41
ABCA6Q8N139 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC30.09■■■□□ 2.41
ABCA6Q8N139 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC30.09■■■□□ 2.41
ABCA6Q8N139 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC30.09■■■□□ 2.41
ABCA6Q8N139 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC30.08■■■□□ 2.41
ABCA6Q8N139 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC30.08■■■□□ 2.41
ABCA6Q8N139 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC30.08■■■□□ 2.41
ABCA6Q8N139 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC30.08■■■□□ 2.41
ABCA6Q8N139 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC30.08■■■□□ 2.41
ABCA6Q8N139 ECEL1P2-202ENST00000465689 757 ntBASIC30.08■■■□□ 2.41
ABCA6Q8N139 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC30.08■■■□□ 2.41
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms