Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC19.76■□□□□ 0.75
TRIM48Q8IWZ4 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
TRIM48Q8IWZ4 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC19.76■□□□□ 0.75
TRIM48Q8IWZ4 OR2A1-AS1-207ENST00000486094 819 ntBASIC19.76■□□□□ 0.75
TRIM48Q8IWZ4 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC19.76■□□□□ 0.75
TRIM48Q8IWZ4 AC006058.3-201ENST00000606217 1069 ntBASIC19.76■□□□□ 0.75
TRIM48Q8IWZ4 ITM2C-210ENST00000620962 501 ntBASIC19.76■□□□□ 0.75
TRIM48Q8IWZ4 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TRIM48Q8IWZ4 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC19.76■□□□□ 0.75
TRIM48Q8IWZ4 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
TRIM48Q8IWZ4 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
TRIM48Q8IWZ4 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TRIM48Q8IWZ4 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC19.76■□□□□ 0.75
TRIM48Q8IWZ4 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
TRIM48Q8IWZ4 AL121603.2-201ENST00000557373 2117 ntBASIC19.75■□□□□ 0.75
TRIM48Q8IWZ4 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TRIM48Q8IWZ4 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
TRIM48Q8IWZ4 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TRIM48Q8IWZ4 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TRIM48Q8IWZ4 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
TRIM48Q8IWZ4 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC19.75■□□□□ 0.75
TRIM48Q8IWZ4 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC19.75■□□□□ 0.75
TRIM48Q8IWZ4 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
TRIM48Q8IWZ4 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TRIM48Q8IWZ4 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TRIM48Q8IWZ4 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
TRIM48Q8IWZ4 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC19.75■□□□□ 0.75
TRIM48Q8IWZ4 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
TRIM48Q8IWZ4 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
TRIM48Q8IWZ4 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TRIM48Q8IWZ4 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TRIM48Q8IWZ4 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
TRIM48Q8IWZ4 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
TRIM48Q8IWZ4 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
TRIM48Q8IWZ4 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC19.74■□□□□ 0.75
TRIM48Q8IWZ4 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
TRIM48Q8IWZ4 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
TRIM48Q8IWZ4 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
TRIM48Q8IWZ4 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC19.74■□□□□ 0.75
TRIM48Q8IWZ4 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC19.74■□□□□ 0.75
TRIM48Q8IWZ4 ADM-205ENST00000528544 586 ntTSL 2 BASIC19.74■□□□□ 0.75
TRIM48Q8IWZ4 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
TRIM48Q8IWZ4 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
TRIM48Q8IWZ4 SOX15-203ENST00000570788 1093 ntBASIC19.74■□□□□ 0.75
TRIM48Q8IWZ4 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC19.74■□□□□ 0.75
TRIM48Q8IWZ4 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
TRIM48Q8IWZ4 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
TRIM48Q8IWZ4 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
TRIM48Q8IWZ4 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
TRIM48Q8IWZ4 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
TRIM48Q8IWZ4 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
TRIM48Q8IWZ4 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
TRIM48Q8IWZ4 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
TRIM48Q8IWZ4 KRT8P36-201ENST00000489121 1440 ntBASIC19.74■□□□□ 0.75
TRIM48Q8IWZ4 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC19.74■□□□□ 0.75
TRIM48Q8IWZ4 PLK5-205ENST00000642079 1969 ntBASIC19.74■□□□□ 0.75
TRIM48Q8IWZ4 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
TRIM48Q8IWZ4 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TRIM48Q8IWZ4 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TRIM48Q8IWZ4 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TRIM48Q8IWZ4 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC19.73■□□□□ 0.75
TRIM48Q8IWZ4 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC19.73■□□□□ 0.75
TRIM48Q8IWZ4 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC19.73■□□□□ 0.75
TRIM48Q8IWZ4 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC19.73■□□□□ 0.75
TRIM48Q8IWZ4 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC19.73■□□□□ 0.75
TRIM48Q8IWZ4 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC19.73■□□□□ 0.75
TRIM48Q8IWZ4 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TRIM48Q8IWZ4 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
TRIM48Q8IWZ4 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TRIM48Q8IWZ4 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TRIM48Q8IWZ4 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TRIM48Q8IWZ4 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TRIM48Q8IWZ4 ERF-202ENST00000440177 2032 ntTSL 2 BASIC19.73■□□□□ 0.75
TRIM48Q8IWZ4 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
TRIM48Q8IWZ4 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC19.72■□□□□ 0.75
TRIM48Q8IWZ4 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC19.72■□□□□ 0.75
TRIM48Q8IWZ4 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
TRIM48Q8IWZ4 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC19.72■□□□□ 0.75
TRIM48Q8IWZ4 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC19.72■□□□□ 0.75
TRIM48Q8IWZ4 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TRIM48Q8IWZ4 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
TRIM48Q8IWZ4 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC19.72■□□□□ 0.75
TRIM48Q8IWZ4 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
TRIM48Q8IWZ4 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
TRIM48Q8IWZ4 GGT1-206ENST00000404223 952 ntTSL 2 BASIC19.72■□□□□ 0.75
TRIM48Q8IWZ4 AL390719.1-204ENST00000412397 1219 ntBASIC19.72■□□□□ 0.75
TRIM48Q8IWZ4 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
TRIM48Q8IWZ4 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
TRIM48Q8IWZ4 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC19.72■□□□□ 0.75
TRIM48Q8IWZ4 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC19.72■□□□□ 0.75
TRIM48Q8IWZ4 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC19.72■□□□□ 0.75
TRIM48Q8IWZ4 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TRIM48Q8IWZ4 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TRIM48Q8IWZ4 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
TRIM48Q8IWZ4 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC19.72■□□□□ 0.75
TRIM48Q8IWZ4 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
TRIM48Q8IWZ4 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
TRIM48Q8IWZ4 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC19.72■□□□□ 0.75
TRIM48Q8IWZ4 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC19.72■□□□□ 0.75
TRIM48Q8IWZ4 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC19.72■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms