Protein–RNA interactions for Protein: Q8IW19

APLF, Aprataxin and PNK-like factor, humanhuman

Predicted RBP Predictions only

Length 511 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APLFQ8IW19 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
APLFQ8IW19 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
APLFQ8IW19 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC19.9■□□□□ 0.78
APLFQ8IW19 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
APLFQ8IW19 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.78
APLFQ8IW19 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
APLFQ8IW19 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
APLFQ8IW19 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC19.89■□□□□ 0.77
APLFQ8IW19 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC19.89■□□□□ 0.77
APLFQ8IW19 AC069152.1-201ENST00000438030 544 ntBASIC19.89■□□□□ 0.77
APLFQ8IW19 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
APLFQ8IW19 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC19.89■□□□□ 0.77
APLFQ8IW19 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
APLFQ8IW19 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC19.89■□□□□ 0.77
APLFQ8IW19 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
APLFQ8IW19 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
APLFQ8IW19 AC133041.1-202ENST00000642053 222 ntBASIC19.89■□□□□ 0.77
APLFQ8IW19 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC19.89■□□□□ 0.77
APLFQ8IW19 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
APLFQ8IW19 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
APLFQ8IW19 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
APLFQ8IW19 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
APLFQ8IW19 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
APLFQ8IW19 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
APLFQ8IW19 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC19.88■□□□□ 0.77
APLFQ8IW19 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
APLFQ8IW19 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC19.88■□□□□ 0.77
APLFQ8IW19 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
APLFQ8IW19 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
APLFQ8IW19 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC19.88■□□□□ 0.77
APLFQ8IW19 AC010536.3-201ENST00000620306 533 ntBASIC19.88■□□□□ 0.77
APLFQ8IW19 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC19.88■□□□□ 0.77
APLFQ8IW19 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
APLFQ8IW19 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
APLFQ8IW19 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC19.88■□□□□ 0.77
APLFQ8IW19 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
APLFQ8IW19 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
APLFQ8IW19 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC19.88■□□□□ 0.77
APLFQ8IW19 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
APLFQ8IW19 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC19.87■□□□□ 0.77
APLFQ8IW19 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
APLFQ8IW19 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
APLFQ8IW19 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
APLFQ8IW19 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
APLFQ8IW19 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
APLFQ8IW19 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
APLFQ8IW19 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
APLFQ8IW19 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
APLFQ8IW19 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
APLFQ8IW19 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC19.87■□□□□ 0.77
APLFQ8IW19 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
APLFQ8IW19 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC19.87■□□□□ 0.77
APLFQ8IW19 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC19.87■□□□□ 0.77
APLFQ8IW19 SLC7A5P1-201ENST00000568957 537 ntBASIC19.87■□□□□ 0.77
APLFQ8IW19 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC19.87■□□□□ 0.77
APLFQ8IW19 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
APLFQ8IW19 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
APLFQ8IW19 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
APLFQ8IW19 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
APLFQ8IW19 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
APLFQ8IW19 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
APLFQ8IW19 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC19.87■□□□□ 0.77
APLFQ8IW19 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
APLFQ8IW19 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
APLFQ8IW19 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC19.87■□□□□ 0.77
APLFQ8IW19 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC19.87■□□□□ 0.77
APLFQ8IW19 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC19.87■□□□□ 0.77
APLFQ8IW19 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
APLFQ8IW19 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
APLFQ8IW19 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
APLFQ8IW19 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC19.86■□□□□ 0.77
APLFQ8IW19 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC19.86■□□□□ 0.77
APLFQ8IW19 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
APLFQ8IW19 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC19.86■□□□□ 0.77
APLFQ8IW19 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
APLFQ8IW19 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
APLFQ8IW19 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
APLFQ8IW19 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
APLFQ8IW19 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
APLFQ8IW19 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC19.86■□□□□ 0.77
APLFQ8IW19 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
APLFQ8IW19 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
APLFQ8IW19 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC19.86■□□□□ 0.77
APLFQ8IW19 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
APLFQ8IW19 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
APLFQ8IW19 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
APLFQ8IW19 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
APLFQ8IW19 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC19.86■□□□□ 0.77
APLFQ8IW19 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC19.85■□□□□ 0.77
APLFQ8IW19 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC19.85■□□□□ 0.77
APLFQ8IW19 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
APLFQ8IW19 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
APLFQ8IW19 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
APLFQ8IW19 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC19.85■□□□□ 0.77
APLFQ8IW19 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
APLFQ8IW19 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
APLFQ8IW19 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
APLFQ8IW19 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
APLFQ8IW19 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC19.85■□□□□ 0.77
APLFQ8IW19 APTR-203ENST00000430801 583 ntTSL 5 BASIC19.85■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms