Protein–RNA interactions for Protein: Q8IV63

VRK3, Inactive serine/threonine-protein kinase VRK3, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3Q8IV63 MYC-209ENST00000641252 345 ntBASIC19.75■□□□□ 0.75
VRK3Q8IV63 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
VRK3Q8IV63 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
VRK3Q8IV63 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
VRK3Q8IV63 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC19.75■□□□□ 0.75
VRK3Q8IV63 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
VRK3Q8IV63 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
VRK3Q8IV63 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
VRK3Q8IV63 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
VRK3Q8IV63 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
VRK3Q8IV63 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
VRK3Q8IV63 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
VRK3Q8IV63 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
VRK3Q8IV63 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
VRK3Q8IV63 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC19.74■□□□□ 0.75
VRK3Q8IV63 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC19.74■□□□□ 0.75
VRK3Q8IV63 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
VRK3Q8IV63 AC069152.1-201ENST00000438030 544 ntBASIC19.74■□□□□ 0.75
VRK3Q8IV63 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC19.74■□□□□ 0.75
VRK3Q8IV63 NME6-213ENST00000451657 871 ntTSL 2 BASIC19.74■□□□□ 0.75
VRK3Q8IV63 RHEB-204ENST00000472642 900 ntTSL 3 BASIC19.74■□□□□ 0.75
VRK3Q8IV63 HES2-205ENST00000487437 968 ntTSL 3 BASIC19.74■□□□□ 0.75
VRK3Q8IV63 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC19.74■□□□□ 0.75
VRK3Q8IV63 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC19.74■□□□□ 0.75
VRK3Q8IV63 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC19.74■□□□□ 0.75
VRK3Q8IV63 BRWD1-AS2-201ENST00000603064 1028 ntBASIC19.74■□□□□ 0.75
VRK3Q8IV63 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC19.74■□□□□ 0.75
VRK3Q8IV63 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
VRK3Q8IV63 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
VRK3Q8IV63 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC19.74■□□□□ 0.75
VRK3Q8IV63 AC112907.3-201ENST00000577781 2400 ntBASIC19.74■□□□□ 0.75
VRK3Q8IV63 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC19.74■□□□□ 0.75
VRK3Q8IV63 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
VRK3Q8IV63 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
VRK3Q8IV63 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
VRK3Q8IV63 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
VRK3Q8IV63 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
VRK3Q8IV63 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC19.73■□□□□ 0.75
VRK3Q8IV63 AC099778.1-201ENST00000568593 1911 ntBASIC19.73■□□□□ 0.75
VRK3Q8IV63 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
VRK3Q8IV63 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
VRK3Q8IV63 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC19.73■□□□□ 0.75
VRK3Q8IV63 EMC9-206ENST00000560403 872 ntTSL 2 BASIC19.73■□□□□ 0.75
VRK3Q8IV63 AC083880.1-201ENST00000608266 535 ntBASIC19.73■□□□□ 0.75
VRK3Q8IV63 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
VRK3Q8IV63 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
VRK3Q8IV63 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
VRK3Q8IV63 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC19.73■□□□□ 0.75
VRK3Q8IV63 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC19.73■□□□□ 0.75
VRK3Q8IV63 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
VRK3Q8IV63 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
VRK3Q8IV63 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
VRK3Q8IV63 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC19.73■□□□□ 0.75
VRK3Q8IV63 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
VRK3Q8IV63 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC19.72■□□□□ 0.75
VRK3Q8IV63 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
VRK3Q8IV63 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
VRK3Q8IV63 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
VRK3Q8IV63 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
VRK3Q8IV63 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC19.72■□□□□ 0.75
VRK3Q8IV63 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
VRK3Q8IV63 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
VRK3Q8IV63 AC073210.2-201ENST00000430369 194 ntBASIC19.72■□□□□ 0.75
VRK3Q8IV63 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC19.72■□□□□ 0.75
VRK3Q8IV63 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC19.72■□□□□ 0.75
VRK3Q8IV63 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC19.72■□□□□ 0.75
VRK3Q8IV63 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
VRK3Q8IV63 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC19.72■□□□□ 0.75
VRK3Q8IV63 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
VRK3Q8IV63 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC19.72■□□□□ 0.75
VRK3Q8IV63 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC19.71■□□□□ 0.75
VRK3Q8IV63 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
VRK3Q8IV63 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC19.71■□□□□ 0.75
VRK3Q8IV63 USP39-204ENST00000409766 2033 ntTSL 2 BASIC19.71■□□□□ 0.75
VRK3Q8IV63 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
VRK3Q8IV63 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
VRK3Q8IV63 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC19.71■□□□□ 0.75
VRK3Q8IV63 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
VRK3Q8IV63 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
VRK3Q8IV63 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC19.71■□□□□ 0.75
VRK3Q8IV63 SERP1-205ENST00000487153 657 ntTSL 4 BASIC19.71■□□□□ 0.75
VRK3Q8IV63 AC133041.1-202ENST00000642053 222 ntBASIC19.71■□□□□ 0.75
VRK3Q8IV63 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
VRK3Q8IV63 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
VRK3Q8IV63 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
VRK3Q8IV63 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC19.71■□□□□ 0.75
VRK3Q8IV63 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC19.71■□□□□ 0.75
VRK3Q8IV63 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
VRK3Q8IV63 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC19.71■□□□□ 0.75
VRK3Q8IV63 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
VRK3Q8IV63 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
VRK3Q8IV63 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
VRK3Q8IV63 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
VRK3Q8IV63 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC19.7■□□□□ 0.74
VRK3Q8IV63 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
VRK3Q8IV63 PCDHAC2-203ENST00000615316 3011 ntBASIC19.7■□□□□ 0.74
VRK3Q8IV63 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
VRK3Q8IV63 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
VRK3Q8IV63 MFF-205ENST00000354503 1085 ntTSL 2 BASIC19.7■□□□□ 0.74
VRK3Q8IV63 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC19.7■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms