Protein–RNA interactions for Protein: Q86WJ1

CHD1L, Chromodomain-helicase-DNA-binding protein 1-like, humanhuman

Predictions only

Length 897 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1LQ86WJ1 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC24.95■■□□□ 1.58
CHD1LQ86WJ1 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
CHD1LQ86WJ1 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC24.95■■□□□ 1.58
CHD1LQ86WJ1 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC24.95■■□□□ 1.58
CHD1LQ86WJ1 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
CHD1LQ86WJ1 GAS2L1P2-201ENST00000436355 1356 ntBASIC24.94■■□□□ 1.58
CHD1LQ86WJ1 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC24.94■■□□□ 1.58
CHD1LQ86WJ1 AC125437.2-201ENST00000625180 2167 ntBASIC24.94■■□□□ 1.58
CHD1LQ86WJ1 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC24.94■■□□□ 1.58
CHD1LQ86WJ1 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
CHD1LQ86WJ1 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC24.94■■□□□ 1.58
CHD1LQ86WJ1 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC24.94■■□□□ 1.58
CHD1LQ86WJ1 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC24.94■■□□□ 1.58
CHD1LQ86WJ1 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC24.94■■□□□ 1.58
CHD1LQ86WJ1 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC24.94■■□□□ 1.58
CHD1LQ86WJ1 PARP1-210ENST00000629232 477 ntTSL 5 BASIC24.94■■□□□ 1.58
CHD1LQ86WJ1 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC24.94■■□□□ 1.58
CHD1LQ86WJ1 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC24.94■■□□□ 1.58
CHD1LQ86WJ1 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
CHD1LQ86WJ1 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC24.94■■□□□ 1.58
CHD1LQ86WJ1 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC24.94■■□□□ 1.58
CHD1LQ86WJ1 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC24.94■■□□□ 1.58
CHD1LQ86WJ1 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC24.94■■□□□ 1.58
CHD1LQ86WJ1 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC24.94■■□□□ 1.58
CHD1LQ86WJ1 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC24.94■■□□□ 1.58
CHD1LQ86WJ1 PTBP1P-201ENST00000554374 1601 ntBASIC24.94■■□□□ 1.58
CHD1LQ86WJ1 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC24.93■■□□□ 1.58
CHD1LQ86WJ1 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC24.93■■□□□ 1.58
CHD1LQ86WJ1 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC24.93■■□□□ 1.58
CHD1LQ86WJ1 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
CHD1LQ86WJ1 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC24.93■■□□□ 1.58
CHD1LQ86WJ1 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC24.93■■□□□ 1.58
CHD1LQ86WJ1 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC24.93■■□□□ 1.58
CHD1LQ86WJ1 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC24.93■■□□□ 1.58
CHD1LQ86WJ1 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC24.93■■□□□ 1.58
CHD1LQ86WJ1 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
CHD1LQ86WJ1 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
CHD1LQ86WJ1 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC24.93■■□□□ 1.58
CHD1LQ86WJ1 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC24.93■■□□□ 1.58
CHD1LQ86WJ1 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC24.93■■□□□ 1.58
CHD1LQ86WJ1 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC24.93■■□□□ 1.58
CHD1LQ86WJ1 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC24.93■■□□□ 1.58
CHD1LQ86WJ1 GCK-205ENST00000437084 1385 ntTSL 5 BASIC24.93■■□□□ 1.58
CHD1LQ86WJ1 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC24.92■■□□□ 1.58
CHD1LQ86WJ1 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
CHD1LQ86WJ1 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
CHD1LQ86WJ1 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
CHD1LQ86WJ1 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC24.92■■□□□ 1.58
CHD1LQ86WJ1 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC24.92■■□□□ 1.58
CHD1LQ86WJ1 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC24.92■■□□□ 1.58
CHD1LQ86WJ1 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC24.92■■□□□ 1.58
CHD1LQ86WJ1 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC24.92■■□□□ 1.58
CHD1LQ86WJ1 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC24.92■■□□□ 1.58
CHD1LQ86WJ1 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC24.92■■□□□ 1.58
CHD1LQ86WJ1 AC231657.2-201ENST00000624556 255 ntBASIC24.92■■□□□ 1.58
CHD1LQ86WJ1 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC24.92■■□□□ 1.58
CHD1LQ86WJ1 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
CHD1LQ86WJ1 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC24.92■■□□□ 1.58
CHD1LQ86WJ1 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC24.92■■□□□ 1.58
CHD1LQ86WJ1 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC24.92■■□□□ 1.58
CHD1LQ86WJ1 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
CHD1LQ86WJ1 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC24.91■■□□□ 1.58
CHD1LQ86WJ1 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC24.91■■□□□ 1.58
CHD1LQ86WJ1 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC24.91■■□□□ 1.58
CHD1LQ86WJ1 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
CHD1LQ86WJ1 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
CHD1LQ86WJ1 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
CHD1LQ86WJ1 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC24.91■■□□□ 1.58
CHD1LQ86WJ1 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
CHD1LQ86WJ1 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC24.91■■□□□ 1.58
CHD1LQ86WJ1 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC24.91■■□□□ 1.58
CHD1LQ86WJ1 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC24.91■■□□□ 1.58
CHD1LQ86WJ1 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC24.91■■□□□ 1.58
CHD1LQ86WJ1 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC24.91■■□□□ 1.58
CHD1LQ86WJ1 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC24.91■■□□□ 1.58
CHD1LQ86WJ1 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
CHD1LQ86WJ1 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
CHD1LQ86WJ1 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC24.9■■□□□ 1.58
CHD1LQ86WJ1 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC24.9■■□□□ 1.58
CHD1LQ86WJ1 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
CHD1LQ86WJ1 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
CHD1LQ86WJ1 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC24.9■■□□□ 1.58
CHD1LQ86WJ1 KRT18P68-201ENST00000392293 1000 ntBASIC24.9■■□□□ 1.58
CHD1LQ86WJ1 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC24.9■■□□□ 1.58
CHD1LQ86WJ1 AC007322.1-201ENST00000426983 750 ntBASIC24.9■■□□□ 1.58
CHD1LQ86WJ1 MAZ-216ENST00000616501 991 ntTSL 5 BASIC24.9■■□□□ 1.58
CHD1LQ86WJ1 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC24.9■■□□□ 1.58
CHD1LQ86WJ1 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
CHD1LQ86WJ1 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC24.9■■□□□ 1.58
CHD1LQ86WJ1 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC24.9■■□□□ 1.58
CHD1LQ86WJ1 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC24.9■■□□□ 1.58
CHD1LQ86WJ1 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC24.9■■□□□ 1.58
CHD1LQ86WJ1 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC24.9■■□□□ 1.58
CHD1LQ86WJ1 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC24.9■■□□□ 1.58
CHD1LQ86WJ1 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
CHD1LQ86WJ1 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC24.9■■□□□ 1.58
CHD1LQ86WJ1 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC24.89■■□□□ 1.58
CHD1LQ86WJ1 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC24.89■■□□□ 1.58
CHD1LQ86WJ1 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC24.89■■□□□ 1.58
CHD1LQ86WJ1 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.58
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms