Protein–RNA interactions for Protein: Q71RC2

LARP4, La-related protein 4, humanhuman

Known RBP eCLIP

Length 724 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LARP4Q71RC2 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC16.57■□□□□ 0.244e-8■■■□□ 16.3
LARP4Q71RC2 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC15.3■□□□□ 0.044e-8■■■□□ 16.3
LARP4Q71RC2 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC15.78■□□□□ 0.124e-10■■■□□ 16.3
LARP4Q71RC2 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.044e-10■■■□□ 16.3
LARP4Q71RC2 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC14.82□□□□□ -0.044e-10■■■□□ 16.3
LARP4Q71RC2 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC14.81□□□□□ -0.044e-10■■■□□ 16.3
LARP4Q71RC2 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC14.7□□□□□ -0.064e-10■■■□□ 16.3
LARP4Q71RC2 EIF4G1-201ENST00000342981 5667 ntAPPRIS ALT1 TSL 1 (best) BASIC14.08□□□□□ -0.164e-10■■■□□ 16.3
LARP4Q71RC2 EIF4G1-212ENST00000424196 5653 ntTSL 2 BASIC14.04□□□□□ -0.164e-10■■■□□ 16.3
LARP4Q71RC2 EIF4G1-222ENST00000442406 5129 ntTSL 1 (best)13.7□□□□□ -0.224e-10■■■□□ 16.3
LARP4Q71RC2 EGFL7-206ENST00000492002 654 ntTSL 521.04■□□□□ 0.963e-7■■■□□ 16.3
LARP4Q71RC2 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.833e-7■■■□□ 16.3
LARP4Q71RC2 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.673e-7■■■□□ 16.3
LARP4Q71RC2 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.533e-7■■■□□ 16.3
LARP4Q71RC2 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.433e-7■■■□□ 16.3
LARP4Q71RC2 RPL36AL-201ENST00000298289 746 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.572e-6■■■□□ 16.3
LARP4Q71RC2 PSME1-206ENST00000559741 763 ntTSL 39.17□□□□□ -0.943e-10■■■□□ 16.3
LARP4Q71RC2 PSME1-204ENST00000558112 651 ntTSL 58.41□□□□□ -1.063e-10■■■□□ 16.3
LARP4Q71RC2 CARHSP1-208ENST00000567554 598 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.42e-12■■■□□ 16.3
LARP4Q71RC2 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.572e-6■■■□□ 16.3
LARP4Q71RC2 SLCO4A1-208ENST00000497209 3092 ntTSL 1 (best)15.04■□□□□ -02e-6■■■□□ 16.3
LARP4Q71RC2 COX7C-201ENST00000247655 666 ntAPPRIS P2 TSL 1 (best) BASIC9.47□□□□□ -0.896e-13■■■□□ 16.3
LARP4Q71RC2 COX7C-207ENST00000515763 347 ntAPPRIS ALT1 TSL 4 BASIC9.47□□□□□ -0.896e-13■■■□□ 16.3
LARP4Q71RC2 COX7C-203ENST00000509578 1584 ntAPPRIS P2 TSL 1 (best) BASIC7.12□□□□□ -1.276e-13■■■□□ 16.3
LARP4Q71RC2 COX7C-206ENST00000513124 693 ntTSL 55.67□□□□□ -1.56e-13■■■□□ 16.3
LARP4Q71RC2 COX7C-202ENST00000505430 496 ntTSL 34.82□□□□□ -1.646e-13■■■□□ 16.3
LARP4Q71RC2 COX7C-205ENST00000511472 369 ntTSL 24.75□□□□□ -1.656e-13■■■□□ 16.3
LARP4Q71RC2 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC18.31■□□□□ 0.527e-7■■■□□ 16.3
LARP4Q71RC2 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC15.09■□□□□ 0.012e-6■■■□□ 16.3
LARP4Q71RC2 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC18.48■□□□□ 0.551e-12■■■□□ 16.3
LARP4Q71RC2 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC14.84□□□□□ -0.031e-12■■■□□ 16.3
LARP4Q71RC2 CARHSP1-216ENST00000610831 2841 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.191e-12■■■□□ 16.3
LARP4Q71RC2 CARHSP1-220ENST00000619881 2849 ntAPPRIS P1 TSL 3 BASIC13.51□□□□□ -0.251e-12■■■□□ 16.3
LARP4Q71RC2 CARHSP1-202ENST00000396593 3026 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.361e-12■■■□□ 16.3
LARP4Q71RC2 CARHSP1-218ENST00000614449 2931 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.381e-12■■■□□ 16.3
LARP4Q71RC2 FXYD2-207ENST00000533281 375 ntTSL 215.26■□□□□ 0.038e-7■■■□□ 16.3
LARP4Q71RC2 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.494e-10■■■□□ 16.3
LARP4Q71RC2 PFDN6-207ENST00000491382 989 ntTSL 214.68□□□□□ -0.064e-10■■■□□ 16.3
LARP4Q71RC2 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.134e-10■■■□□ 16.3
LARP4Q71RC2 NIPBL-202ENST00000448238 8729 ntTSL 1 (best) BASIC8.61□□□□□ -1.034e-10■■■□□ 16.3
LARP4Q71RC2 NIPBL-201ENST00000282516 10435 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.084e-10■■■□□ 16.3
LARP4Q71RC2 NIPBL-205ENST00000505998 969 ntTSL 57.69□□□□□ -1.184e-10■■■□□ 16.3
LARP4Q71RC2 NIPBL-204ENST00000504430 3455 ntTSL 25.18□□□□□ -1.584e-10■■■□□ 16.3
LARP4Q71RC2 BCL2L1-203ENST00000376062 2578 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.251e-6■■■□□ 16.3
LARP4Q71RC2 BCL2L1-201ENST00000307677 2610 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.281e-6■■■□□ 16.3
LARP4Q71RC2 BCL2L1-202ENST00000376055 2383 ntTSL 2 BASIC13.22□□□□□ -0.291e-6■■■□□ 16.3
LARP4Q71RC2 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.371e-16■■■□□ 16.3
LARP4Q71RC2 RNF187-202ENST00000482739 2467 ntTSL 514.03□□□□□ -0.161e-16■■■□□ 16.3
LARP4Q71RC2 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.811e-8■■■□□ 16.2
LARP4Q71RC2 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.124e-17■■■□□ 16.2
LARP4Q71RC2 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC14.91□□□□□ -0.024e-17■■■□□ 16.2
LARP4Q71RC2 ACIN1-201ENST00000262710 4935 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.234e-17■■■□□ 16.2
LARP4Q71RC2 ACIN1-204ENST00000397341 2738 ntTSL 1 (best) BASIC13.57□□□□□ -0.244e-17■■■□□ 16.2
LARP4Q71RC2 ACIN1-202ENST00000338631 2445 ntTSL 1 (best) BASIC13.52□□□□□ -0.254e-17■■■□□ 16.2
LARP4Q71RC2 ACIN1-222ENST00000557515 2751 ntTSL 5 BASIC12.69□□□□□ -0.384e-17■■■□□ 16.2
LARP4Q71RC2 ACIN1-213ENST00000555053 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.444e-17■■■□□ 16.2
LARP4Q71RC2 ACIN1-223ENST00000605057 4474 ntTSL 1 (best) BASIC11.12□□□□□ -0.634e-17■■■□□ 16.2
LARP4Q71RC2 ACIN1-206ENST00000473758 3540 ntTSL 1 (best)11.12□□□□□ -0.634e-17■■■□□ 16.2
LARP4Q71RC2 CAPNS1-209ENST00000590049 592 ntAPPRIS ALT2 TSL 510.8□□□□□ -0.685e-7■■■□□ 16.2
LARP4Q71RC2 CAPNS1-210ENST00000590211 403 ntTSL 54.64□□□□□ -1.675e-7■■■□□ 16.2
LARP4Q71RC2 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC15.46■□□□□ 0.078e-10■■■□□ 16.2
LARP4Q71RC2 ANP32E-210ENST00000629042 3054 ntTSL 5 BASIC12.51□□□□□ -0.418e-10■■■□□ 16.2
LARP4Q71RC2 ANP32E-208ENST00000583931 3451 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.778e-10■■■□□ 16.2
LARP4Q71RC2 ANP32E-203ENST00000436748 1339 ntTSL 2 BASIC8.28□□□□□ -1.088e-10■■■□□ 16.2
LARP4Q71RC2 ANP32E-205ENST00000533654 908 ntTSL 2 BASIC6.82□□□□□ -1.328e-10■■■□□ 16.2
LARP4Q71RC2 ANP32E-202ENST00000369115 708 ntTSL 3 BASIC5.34□□□□□ -1.558e-10■■■□□ 16.2
LARP4Q71RC2 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC26.25■■□□□ 1.792e-7■■■□□ 16.2
LARP4Q71RC2 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC21.45■■□□□ 1.032e-7■■■□□ 16.2
LARP4Q71RC2 TPI1-202ENST00000396705 1231 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.672e-7■■■□□ 16.2
LARP4Q71RC2 TPI1-209ENST00000535434 1587 ntTSL 2 BASIC9.93□□□□□ -0.822e-7■■■□□ 16.2
LARP4Q71RC2 GTF3C1-207ENST00000567806 584 ntTSL 417.08■□□□□ 0.323e-11■■■□□ 16.2
LARP4Q71RC2 HLA-E-201ENST00000376630 2601 ntAPPRIS P1 BASIC12.43□□□□□ -0.421e-6■■■□□ 16.2
LARP4Q71RC2 AC069277.1-201ENST00000433639 1083 ntTSL 1 (best) BASIC11.01□□□□□ -0.657e-7■■■□□ 16.2
LARP4Q71RC2 AC069277.1-204ENST00000342990 246 ntTSL 36.76□□□□□ -1.337e-7■■■□□ 16.2
LARP4Q71RC2 HLA-A-207ENST00000495183 1766 nt22.96■■□□□ 1.276e-12■■■□□ 16.2
LARP4Q71RC2 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC16.97■□□□□ 0.316e-12■■■□□ 16.2
LARP4Q71RC2 HLA-A-202ENST00000376806 1854 ntBASIC16.59■□□□□ 0.256e-12■■■□□ 16.2
LARP4Q71RC2 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC16.18■□□□□ 0.186e-12■■■□□ 16.2
LARP4Q71RC2 HLA-A-208ENST00000496081 1786 nt16.02■□□□□ 0.156e-12■■■□□ 16.2
LARP4Q71RC2 HLA-A-201ENST00000376802 1334 ntBASIC15.78■□□□□ 0.126e-12■■■□□ 16.2
LARP4Q71RC2 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC20.8■□□□□ 0.923e-8■■■□□ 16.2
LARP4Q71RC2 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.923e-8■■■□□ 16.2
LARP4Q71RC2 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC19.07■□□□□ 0.643e-8■■■□□ 16.2
LARP4Q71RC2 YIF1A-209ENST00000494836 540 ntTSL 215.01□□□□□ -0.013e-8■■■□□ 16.2
LARP4Q71RC2 YIF1A-208ENST00000485820 653 ntTSL 213.68□□□□□ -0.223e-8■■■□□ 16.2
LARP4Q71RC2 YIF1A-211ENST00000526497 516 ntTSL 513.06□□□□□ -0.323e-8■■■□□ 16.2
LARP4Q71RC2 ECH1-201ENST00000221418 1411 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.431e-6■■■□□ 16.2
LARP4Q71RC2 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC23.35■■□□□ 1.332e-7■■■□□ 16.2
LARP4Q71RC2 NECTIN2-203ENST00000585601 650 ntTSL 314.71□□□□□ -0.052e-7■■■□□ 16.2
LARP4Q71RC2 NECTIN2-201ENST00000252483 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.322e-7■■■□□ 16.2
LARP4Q71RC2 NECTIN2-205ENST00000591581 950 ntTSL 213.02□□□□□ -0.332e-7■■■□□ 16.2
LARP4Q71RC2 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.361e-7■■■□□ 16.2
LARP4Q71RC2 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC14.61□□□□□ -0.071e-7■■■□□ 16.2
LARP4Q71RC2 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.161e-7■■■□□ 16.2
LARP4Q71RC2 TOMM5-203ENST00000401811 789 ntTSL 2 BASIC12.57□□□□□ -0.41e-7■■■□□ 16.2
LARP4Q71RC2 TOMM5-202ENST00000377773 808 ntTSL 1 (best) BASIC12.15□□□□□ -0.461e-7■■■□□ 16.2
LARP4Q71RC2 TOMM5-204ENST00000540941 3071 ntTSL 1 (best)11.41□□□□□ -0.581e-7■■■□□ 16.2
LARP4Q71RC2 AL513165.2-203ENST00000537239 717 ntAPPRIS P1 TSL 5 BASIC10.19□□□□□ -0.781e-7■■■□□ 16.2
LARP4Q71RC2 RPLP2-206ENST00000530398 313 ntTSL 310.77□□□□□ -0.692e-51■■■□□ 16.1
LARP4Q71RC2 HDGF-202ENST00000368206 960 ntTSL 5 BASIC12.02□□□□□ -0.495e-9■■■□□ 16.1
Retrieved 100 of 15,922 protein–RNA pairs in 189 ms