Protein–RNA interactions for Protein: Q71F78

LCA10, Putative lung carcinoma-associated protein 10, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCA10Q71F78 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC10.85□□□□□ -0.67
LCA10Q71F78 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
LCA10Q71F78 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
LCA10Q71F78 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC10.85□□□□□ -0.67
LCA10Q71F78 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
LCA10Q71F78 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
LCA10Q71F78 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
LCA10Q71F78 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
LCA10Q71F78 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC10.85□□□□□ -0.67
LCA10Q71F78 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC10.85□□□□□ -0.67
LCA10Q71F78 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
LCA10Q71F78 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC10.85□□□□□ -0.67
LCA10Q71F78 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
LCA10Q71F78 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
LCA10Q71F78 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
LCA10Q71F78 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
LCA10Q71F78 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC10.84□□□□□ -0.67
LCA10Q71F78 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
LCA10Q71F78 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC10.84□□□□□ -0.67
LCA10Q71F78 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
LCA10Q71F78 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
LCA10Q71F78 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
LCA10Q71F78 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
LCA10Q71F78 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
LCA10Q71F78 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
LCA10Q71F78 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
LCA10Q71F78 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC10.84□□□□□ -0.67
LCA10Q71F78 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC10.84□□□□□ -0.67
LCA10Q71F78 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC10.84□□□□□ -0.67
LCA10Q71F78 PKD1P1-201ENST00000458669 6805 ntBASIC10.84□□□□□ -0.67
LCA10Q71F78 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC10.84□□□□□ -0.67
LCA10Q71F78 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
LCA10Q71F78 AC103834.1-201ENST00000520383 144 ntBASIC10.84□□□□□ -0.67
LCA10Q71F78 TK2-216ENST00000564917 1156 ntTSL 3 BASIC10.84□□□□□ -0.67
LCA10Q71F78 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC10.84□□□□□ -0.67
LCA10Q71F78 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC10.84□□□□□ -0.67
LCA10Q71F78 AC009086.3-201ENST00000623486 1008 ntBASIC10.84□□□□□ -0.67
LCA10Q71F78 AC012354.3-201ENST00000623734 483 ntBASIC10.84□□□□□ -0.67
LCA10Q71F78 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC10.84□□□□□ -0.67
LCA10Q71F78 FP325331.1-202ENST00000623531 1380 ntBASIC10.84□□□□□ -0.67
LCA10Q71F78 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC10.84□□□□□ -0.67
LCA10Q71F78 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
LCA10Q71F78 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC10.84□□□□□ -0.67
LCA10Q71F78 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC10.84□□□□□ -0.67
LCA10Q71F78 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC10.84□□□□□ -0.67
LCA10Q71F78 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
LCA10Q71F78 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
LCA10Q71F78 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
LCA10Q71F78 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC10.84□□□□□ -0.67
LCA10Q71F78 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC10.84□□□□□ -0.67
LCA10Q71F78 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
LCA10Q71F78 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC10.83□□□□□ -0.67
LCA10Q71F78 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC10.83□□□□□ -0.68
LCA10Q71F78 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC10.83□□□□□ -0.68
LCA10Q71F78 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
LCA10Q71F78 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC10.83□□□□□ -0.68
LCA10Q71F78 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
LCA10Q71F78 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
LCA10Q71F78 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
LCA10Q71F78 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC10.83□□□□□ -0.68
LCA10Q71F78 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
LCA10Q71F78 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC10.83□□□□□ -0.68
LCA10Q71F78 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC10.83□□□□□ -0.68
LCA10Q71F78 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
LCA10Q71F78 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
LCA10Q71F78 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC10.83□□□□□ -0.68
LCA10Q71F78 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
LCA10Q71F78 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC10.83□□□□□ -0.68
LCA10Q71F78 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
LCA10Q71F78 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC10.83□□□□□ -0.68
LCA10Q71F78 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
LCA10Q71F78 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC10.83□□□□□ -0.68
LCA10Q71F78 AL033527.3-201ENST00000566366 1196 ntBASIC10.83□□□□□ -0.68
LCA10Q71F78 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC10.83□□□□□ -0.68
LCA10Q71F78 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC10.83□□□□□ -0.68
LCA10Q71F78 AC137630.3-201ENST00000607245 391 ntBASIC10.83□□□□□ -0.68
LCA10Q71F78 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC10.83□□□□□ -0.68
LCA10Q71F78 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
LCA10Q71F78 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC10.83□□□□□ -0.68
LCA10Q71F78 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
LCA10Q71F78 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC10.83□□□□□ -0.68
LCA10Q71F78 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
LCA10Q71F78 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
LCA10Q71F78 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
LCA10Q71F78 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
LCA10Q71F78 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
LCA10Q71F78 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC10.83□□□□□ -0.68
LCA10Q71F78 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
LCA10Q71F78 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC10.83□□□□□ -0.68
LCA10Q71F78 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC10.83□□□□□ -0.68
LCA10Q71F78 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
LCA10Q71F78 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC10.83□□□□□ -0.68
LCA10Q71F78 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
LCA10Q71F78 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
LCA10Q71F78 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
LCA10Q71F78 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
LCA10Q71F78 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC10.83□□□□□ -0.68
LCA10Q71F78 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
LCA10Q71F78 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC10.83□□□□□ -0.68
LCA10Q71F78 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
Retrieved 100 of 98,524 protein–RNA pairs in 39.1 ms