Protein–RNA interactions for Protein: Q6TDU7

CASC1, Protein CASC1, humanhuman

Predictions only

Length 716 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASC1Q6TDU7 BRI3-207ENST00000539286 699 ntTSL 2 BASIC24.63■■□□□ 1.53
CASC1Q6TDU7 DBI-210ENST00000542275 757 ntTSL 5 BASIC24.63■■□□□ 1.53
CASC1Q6TDU7 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC24.63■■□□□ 1.53
CASC1Q6TDU7 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC24.63■■□□□ 1.53
CASC1Q6TDU7 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
CASC1Q6TDU7 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC24.63■■□□□ 1.53
CASC1Q6TDU7 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
CASC1Q6TDU7 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC24.63■■□□□ 1.53
CASC1Q6TDU7 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
CASC1Q6TDU7 TCF3P1-201ENST00000423021 1937 ntBASIC24.63■■□□□ 1.53
CASC1Q6TDU7 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
CASC1Q6TDU7 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC24.62■■□□□ 1.53
CASC1Q6TDU7 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC24.62■■□□□ 1.53
CASC1Q6TDU7 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
CASC1Q6TDU7 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC24.62■■□□□ 1.53
CASC1Q6TDU7 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
CASC1Q6TDU7 AC137761.2-201ENST00000561729 223 ntBASIC24.62■■□□□ 1.53
CASC1Q6TDU7 AC145350.3-201ENST00000569033 163 ntBASIC24.62■■□□□ 1.53
CASC1Q6TDU7 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
CASC1Q6TDU7 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
CASC1Q6TDU7 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
CASC1Q6TDU7 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC24.62■■□□□ 1.53
CASC1Q6TDU7 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
CASC1Q6TDU7 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
CASC1Q6TDU7 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC24.62■■□□□ 1.53
CASC1Q6TDU7 AFG3L1P-217ENST00000557444 2447 ntBASIC24.62■■□□□ 1.53
CASC1Q6TDU7 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC24.62■■□□□ 1.53
CASC1Q6TDU7 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC24.61■■□□□ 1.53
CASC1Q6TDU7 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC24.61■■□□□ 1.53
CASC1Q6TDU7 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
CASC1Q6TDU7 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC24.61■■□□□ 1.53
CASC1Q6TDU7 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC24.61■■□□□ 1.53
CASC1Q6TDU7 STX7-201ENST00000367937 1090 ntTSL 5 BASIC24.61■■□□□ 1.53
CASC1Q6TDU7 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC24.61■■□□□ 1.53
CASC1Q6TDU7 BMP1-204ENST00000397814 836 ntTSL 4 BASIC24.61■■□□□ 1.53
CASC1Q6TDU7 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC24.61■■□□□ 1.53
CASC1Q6TDU7 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
CASC1Q6TDU7 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
CASC1Q6TDU7 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC24.61■■□□□ 1.53
CASC1Q6TDU7 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC24.61■■□□□ 1.53
CASC1Q6TDU7 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
CASC1Q6TDU7 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC24.61■■□□□ 1.53
CASC1Q6TDU7 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC24.6■■□□□ 1.53
CASC1Q6TDU7 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
CASC1Q6TDU7 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
CASC1Q6TDU7 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC24.6■■□□□ 1.53
CASC1Q6TDU7 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
CASC1Q6TDU7 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC24.6■■□□□ 1.53
CASC1Q6TDU7 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC24.6■■□□□ 1.53
CASC1Q6TDU7 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
CASC1Q6TDU7 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC24.6■■□□□ 1.53
CASC1Q6TDU7 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC24.6■■□□□ 1.53
CASC1Q6TDU7 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
CASC1Q6TDU7 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
CASC1Q6TDU7 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
CASC1Q6TDU7 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC24.59■■□□□ 1.53
CASC1Q6TDU7 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC24.59■■□□□ 1.53
CASC1Q6TDU7 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
CASC1Q6TDU7 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC24.59■■□□□ 1.53
CASC1Q6TDU7 VMO1-204ENST00000441199 741 ntTSL 2 BASIC24.59■■□□□ 1.53
CASC1Q6TDU7 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC24.59■■□□□ 1.53
CASC1Q6TDU7 PBX1-209ENST00000485769 834 ntTSL 2 BASIC24.59■■□□□ 1.53
CASC1Q6TDU7 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC24.59■■□□□ 1.53
CASC1Q6TDU7 AC013268.1-206ENST00000638368 961 ntBASIC24.59■■□□□ 1.53
CASC1Q6TDU7 AC112229.1-201ENST00000639295 961 ntBASIC24.59■■□□□ 1.53
CASC1Q6TDU7 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC24.59■■□□□ 1.53
CASC1Q6TDU7 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC24.59■■□□□ 1.53
CASC1Q6TDU7 AC087633.2-202ENST00000565166 1439 ntBASIC24.59■■□□□ 1.53
CASC1Q6TDU7 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC24.59■■□□□ 1.53
CASC1Q6TDU7 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC24.59■■□□□ 1.53
CASC1Q6TDU7 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC24.59■■□□□ 1.53
CASC1Q6TDU7 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC24.59■■□□□ 1.53
CASC1Q6TDU7 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC24.58■■□□□ 1.53
CASC1Q6TDU7 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
CASC1Q6TDU7 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC24.58■■□□□ 1.53
CASC1Q6TDU7 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC24.58■■□□□ 1.53
CASC1Q6TDU7 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC24.58■■□□□ 1.53
CASC1Q6TDU7 AL162412.1-201ENST00000567129 965 ntBASIC24.58■■□□□ 1.53
CASC1Q6TDU7 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC24.58■■□□□ 1.53
CASC1Q6TDU7 AL356652.1-201ENST00000615962 565 ntBASIC24.58■■□□□ 1.53
CASC1Q6TDU7 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
CASC1Q6TDU7 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
CASC1Q6TDU7 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
CASC1Q6TDU7 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC24.58■■□□□ 1.52
CASC1Q6TDU7 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC24.58■■□□□ 1.52
CASC1Q6TDU7 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.52
CASC1Q6TDU7 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC24.58■■□□□ 1.52
CASC1Q6TDU7 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC24.58■■□□□ 1.52
CASC1Q6TDU7 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC24.57■■□□□ 1.52
CASC1Q6TDU7 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC24.57■■□□□ 1.52
CASC1Q6TDU7 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
CASC1Q6TDU7 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
CASC1Q6TDU7 BID-204ENST00000399767 2129 ntTSL 2 BASIC24.57■■□□□ 1.52
CASC1Q6TDU7 AC016769.1-201ENST00000409132 1010 ntBASIC24.57■■□□□ 1.52
CASC1Q6TDU7 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
CASC1Q6TDU7 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
CASC1Q6TDU7 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC24.57■■□□□ 1.52
CASC1Q6TDU7 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC24.57■■□□□ 1.52
CASC1Q6TDU7 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC24.57■■□□□ 1.52
CASC1Q6TDU7 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC24.57■■□□□ 1.52
Retrieved 100 of 98,524 protein–RNA pairs in 60.9 ms