Protein–RNA interactions for Protein: Q6PI97

C11orf88, UPF0722 protein C11orf88, humanhuman

Predictions only

Length 169 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88Q6PI97 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
C11orf88Q6PI97 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC17.5■□□□□ 0.39
C11orf88Q6PI97 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
C11orf88Q6PI97 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
C11orf88Q6PI97 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
C11orf88Q6PI97 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC17.5■□□□□ 0.39
C11orf88Q6PI97 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC17.5■□□□□ 0.39
C11orf88Q6PI97 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
C11orf88Q6PI97 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
C11orf88Q6PI97 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
C11orf88Q6PI97 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
C11orf88Q6PI97 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
C11orf88Q6PI97 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
C11orf88Q6PI97 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC17.49■□□□□ 0.39
C11orf88Q6PI97 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
C11orf88Q6PI97 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
C11orf88Q6PI97 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
C11orf88Q6PI97 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
C11orf88Q6PI97 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
C11orf88Q6PI97 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
C11orf88Q6PI97 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC17.49■□□□□ 0.39
C11orf88Q6PI97 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC17.49■□□□□ 0.39
C11orf88Q6PI97 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC17.49■□□□□ 0.39
C11orf88Q6PI97 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC17.49■□□□□ 0.39
C11orf88Q6PI97 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC17.49■□□□□ 0.39
C11orf88Q6PI97 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
C11orf88Q6PI97 PLK5-205ENST00000642079 1969 ntBASIC17.49■□□□□ 0.39
C11orf88Q6PI97 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
C11orf88Q6PI97 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
C11orf88Q6PI97 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
C11orf88Q6PI97 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC17.49■□□□□ 0.39
C11orf88Q6PI97 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
C11orf88Q6PI97 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
C11orf88Q6PI97 AC020907.5-201ENST00000624372 1936 ntBASIC17.49■□□□□ 0.39
C11orf88Q6PI97 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
C11orf88Q6PI97 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC17.48■□□□□ 0.39
C11orf88Q6PI97 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
C11orf88Q6PI97 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
C11orf88Q6PI97 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
C11orf88Q6PI97 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
C11orf88Q6PI97 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
C11orf88Q6PI97 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC17.48■□□□□ 0.39
C11orf88Q6PI97 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
C11orf88Q6PI97 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
C11orf88Q6PI97 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC17.48■□□□□ 0.39
C11orf88Q6PI97 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
C11orf88Q6PI97 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
C11orf88Q6PI97 PALM-207ENST00000590161 2137 ntTSL 4 BASIC17.48■□□□□ 0.39
C11orf88Q6PI97 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC17.48■□□□□ 0.39
C11orf88Q6PI97 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
C11orf88Q6PI97 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
C11orf88Q6PI97 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
C11orf88Q6PI97 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC17.47■□□□□ 0.39
C11orf88Q6PI97 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
C11orf88Q6PI97 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
C11orf88Q6PI97 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC17.47■□□□□ 0.39
C11orf88Q6PI97 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC17.47■□□□□ 0.39
C11orf88Q6PI97 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
C11orf88Q6PI97 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC17.47■□□□□ 0.39
C11orf88Q6PI97 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
C11orf88Q6PI97 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
C11orf88Q6PI97 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
C11orf88Q6PI97 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC17.47■□□□□ 0.39
C11orf88Q6PI97 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
C11orf88Q6PI97 AC012414.1-201ENST00000556676 535 ntBASIC17.47■□□□□ 0.39
C11orf88Q6PI97 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC17.47■□□□□ 0.39
C11orf88Q6PI97 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC17.47■□□□□ 0.39
C11orf88Q6PI97 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
C11orf88Q6PI97 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
C11orf88Q6PI97 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC17.47■□□□□ 0.39
C11orf88Q6PI97 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
C11orf88Q6PI97 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
C11orf88Q6PI97 BX323043.1-201ENST00000641006 1765 ntBASIC17.47■□□□□ 0.39
C11orf88Q6PI97 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
C11orf88Q6PI97 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
C11orf88Q6PI97 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
C11orf88Q6PI97 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
C11orf88Q6PI97 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
C11orf88Q6PI97 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
C11orf88Q6PI97 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
C11orf88Q6PI97 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC17.46■□□□□ 0.39
C11orf88Q6PI97 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
C11orf88Q6PI97 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC17.46■□□□□ 0.39
C11orf88Q6PI97 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC17.46■□□□□ 0.39
C11orf88Q6PI97 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC17.46■□□□□ 0.39
C11orf88Q6PI97 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
C11orf88Q6PI97 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC17.46■□□□□ 0.39
C11orf88Q6PI97 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
C11orf88Q6PI97 AC098818.2-201ENST00000564925 2320 ntBASIC17.46■□□□□ 0.39
C11orf88Q6PI97 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC17.46■□□□□ 0.39
C11orf88Q6PI97 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
C11orf88Q6PI97 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC17.46■□□□□ 0.39
C11orf88Q6PI97 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
C11orf88Q6PI97 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC17.46■□□□□ 0.39
C11orf88Q6PI97 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
C11orf88Q6PI97 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
C11orf88Q6PI97 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC17.46■□□□□ 0.39
C11orf88Q6PI97 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
C11orf88Q6PI97 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
C11orf88Q6PI97 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC17.46■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 17.2 ms