Protein–RNA interactions for Protein: Q5VT99

LRRC38, Leucine-rich repeat-containing protein 38, humanhuman

Predictions only

Length 294 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC38Q5VT99 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
LRRC38Q5VT99 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
LRRC38Q5VT99 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
LRRC38Q5VT99 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
LRRC38Q5VT99 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC20.97■□□□□ 0.95
LRRC38Q5VT99 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
LRRC38Q5VT99 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
LRRC38Q5VT99 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC20.97■□□□□ 0.95
LRRC38Q5VT99 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
LRRC38Q5VT99 TMEM179-206ENST00000616017 1645 ntBASIC20.97■□□□□ 0.95
LRRC38Q5VT99 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
LRRC38Q5VT99 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC20.97■□□□□ 0.95
LRRC38Q5VT99 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC20.97■□□□□ 0.95
LRRC38Q5VT99 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC20.97■□□□□ 0.95
LRRC38Q5VT99 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC20.97■□□□□ 0.95
LRRC38Q5VT99 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC20.97■□□□□ 0.95
LRRC38Q5VT99 BID-214ENST00000617586 542 ntTSL 5 BASIC20.97■□□□□ 0.95
LRRC38Q5VT99 PARP1-210ENST00000629232 477 ntTSL 5 BASIC20.97■□□□□ 0.95
LRRC38Q5VT99 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC20.97■□□□□ 0.95
LRRC38Q5VT99 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
LRRC38Q5VT99 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
LRRC38Q5VT99 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
LRRC38Q5VT99 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
LRRC38Q5VT99 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
LRRC38Q5VT99 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
LRRC38Q5VT99 GCK-205ENST00000437084 1385 ntTSL 5 BASIC20.97■□□□□ 0.95
LRRC38Q5VT99 LBX2-AS1-202ENST00000603175 2083 ntBASIC20.97■□□□□ 0.95
LRRC38Q5VT99 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC20.96■□□□□ 0.95
LRRC38Q5VT99 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC20.96■□□□□ 0.95
LRRC38Q5VT99 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC20.96■□□□□ 0.95
LRRC38Q5VT99 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
LRRC38Q5VT99 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC20.96■□□□□ 0.95
LRRC38Q5VT99 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
LRRC38Q5VT99 KRT18P68-201ENST00000392293 1000 ntBASIC20.96■□□□□ 0.95
LRRC38Q5VT99 BET1L-204ENST00000410108 637 ntTSL 3 BASIC20.96■□□□□ 0.95
LRRC38Q5VT99 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
LRRC38Q5VT99 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
LRRC38Q5VT99 AL162430.1-201ENST00000480705 870 ntBASIC20.96■□□□□ 0.95
LRRC38Q5VT99 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC20.96■□□□□ 0.95
LRRC38Q5VT99 AC105020.6-201ENST00000621523 1217 ntBASIC20.96■□□□□ 0.95
LRRC38Q5VT99 AC231657.2-201ENST00000624556 255 ntBASIC20.96■□□□□ 0.95
LRRC38Q5VT99 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
LRRC38Q5VT99 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
LRRC38Q5VT99 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
LRRC38Q5VT99 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC20.96■□□□□ 0.95
LRRC38Q5VT99 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.95
LRRC38Q5VT99 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.95
LRRC38Q5VT99 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
LRRC38Q5VT99 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
LRRC38Q5VT99 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
LRRC38Q5VT99 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
LRRC38Q5VT99 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
LRRC38Q5VT99 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC20.95■□□□□ 0.94
LRRC38Q5VT99 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC20.95■□□□□ 0.94
LRRC38Q5VT99 AC069236.1-201ENST00000604339 616 ntBASIC20.95■□□□□ 0.94
LRRC38Q5VT99 MIR5787-201ENST00000611784 55 ntBASIC20.95■□□□□ 0.94
LRRC38Q5VT99 ANKRD20A6P-201ENST00000618763 204 ntBASIC20.95■□□□□ 0.94
LRRC38Q5VT99 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
LRRC38Q5VT99 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
LRRC38Q5VT99 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC20.95■□□□□ 0.94
LRRC38Q5VT99 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
LRRC38Q5VT99 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC20.95■□□□□ 0.94
LRRC38Q5VT99 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
LRRC38Q5VT99 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
LRRC38Q5VT99 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
LRRC38Q5VT99 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC20.94■□□□□ 0.94
LRRC38Q5VT99 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC20.94■□□□□ 0.94
LRRC38Q5VT99 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC20.94■□□□□ 0.94
LRRC38Q5VT99 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
LRRC38Q5VT99 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC20.94■□□□□ 0.94
LRRC38Q5VT99 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
LRRC38Q5VT99 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
LRRC38Q5VT99 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
LRRC38Q5VT99 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
LRRC38Q5VT99 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
LRRC38Q5VT99 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
LRRC38Q5VT99 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
LRRC38Q5VT99 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC20.93■□□□□ 0.94
LRRC38Q5VT99 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC20.93■□□□□ 0.94
LRRC38Q5VT99 APTR-203ENST00000430801 583 ntTSL 5 BASIC20.93■□□□□ 0.94
LRRC38Q5VT99 CYP2T1P-201ENST00000432607 1285 ntBASIC20.93■□□□□ 0.94
LRRC38Q5VT99 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC20.93■□□□□ 0.94
LRRC38Q5VT99 CYP2T3P-201ENST00000601990 817 ntBASIC20.93■□□□□ 0.94
LRRC38Q5VT99 MDK-213ENST00000617138 635 ntTSL 2 BASIC20.93■□□□□ 0.94
LRRC38Q5VT99 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
LRRC38Q5VT99 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
LRRC38Q5VT99 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC20.93■□□□□ 0.94
LRRC38Q5VT99 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
LRRC38Q5VT99 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
LRRC38Q5VT99 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
LRRC38Q5VT99 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
LRRC38Q5VT99 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
LRRC38Q5VT99 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
LRRC38Q5VT99 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC20.92■□□□□ 0.94
LRRC38Q5VT99 AC125437.2-201ENST00000625180 2167 ntBASIC20.92■□□□□ 0.94
LRRC38Q5VT99 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC20.92■□□□□ 0.94
LRRC38Q5VT99 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
LRRC38Q5VT99 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
LRRC38Q5VT99 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
LRRC38Q5VT99 METTL26-203ENST00000397664 604 ntTSL 2 BASIC20.92■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms