Protein–RNA interactions for Protein: Q5T3J3

LRIF1, Ligand-dependent nuclear receptor-interacting factor 1, humanhuman

Predictions only

Length 769 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRIF1Q5T3J3 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
LRIF1Q5T3J3 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC19.01■□□□□ 0.63
LRIF1Q5T3J3 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC19.01■□□□□ 0.63
LRIF1Q5T3J3 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
LRIF1Q5T3J3 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
LRIF1Q5T3J3 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
LRIF1Q5T3J3 SP2-202ENST00000613139 908 ntTSL 5 BASIC19.01■□□□□ 0.63
LRIF1Q5T3J3 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
LRIF1Q5T3J3 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC19.01■□□□□ 0.63
LRIF1Q5T3J3 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
LRIF1Q5T3J3 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC19.01■□□□□ 0.63
LRIF1Q5T3J3 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
LRIF1Q5T3J3 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC19.01■□□□□ 0.63
LRIF1Q5T3J3 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
LRIF1Q5T3J3 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
LRIF1Q5T3J3 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
LRIF1Q5T3J3 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
LRIF1Q5T3J3 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC19■□□□□ 0.63
LRIF1Q5T3J3 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC19■□□□□ 0.63
LRIF1Q5T3J3 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC19■□□□□ 0.63
LRIF1Q5T3J3 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
LRIF1Q5T3J3 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
LRIF1Q5T3J3 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC19■□□□□ 0.63
LRIF1Q5T3J3 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC19■□□□□ 0.63
LRIF1Q5T3J3 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
LRIF1Q5T3J3 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
LRIF1Q5T3J3 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC19■□□□□ 0.63
LRIF1Q5T3J3 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC19■□□□□ 0.63
LRIF1Q5T3J3 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC19■□□□□ 0.63
LRIF1Q5T3J3 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC19■□□□□ 0.63
LRIF1Q5T3J3 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC19■□□□□ 0.63
LRIF1Q5T3J3 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC19■□□□□ 0.63
LRIF1Q5T3J3 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
LRIF1Q5T3J3 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC19■□□□□ 0.63
LRIF1Q5T3J3 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
LRIF1Q5T3J3 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC19■□□□□ 0.63
LRIF1Q5T3J3 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
LRIF1Q5T3J3 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC19■□□□□ 0.63
LRIF1Q5T3J3 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC19■□□□□ 0.63
LRIF1Q5T3J3 POLI-202ENST00000406285 2030 ntTSL 2 BASIC19■□□□□ 0.63
LRIF1Q5T3J3 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC19■□□□□ 0.63
LRIF1Q5T3J3 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
LRIF1Q5T3J3 AC087633.2-202ENST00000565166 1439 ntBASIC19■□□□□ 0.63
LRIF1Q5T3J3 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
LRIF1Q5T3J3 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC18.99■□□□□ 0.63
LRIF1Q5T3J3 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
LRIF1Q5T3J3 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC18.99■□□□□ 0.63
LRIF1Q5T3J3 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
LRIF1Q5T3J3 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC18.99■□□□□ 0.63
LRIF1Q5T3J3 TREX1-205ENST00000625293 1783 ntBASIC18.99■□□□□ 0.63
LRIF1Q5T3J3 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
LRIF1Q5T3J3 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
LRIF1Q5T3J3 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
LRIF1Q5T3J3 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
LRIF1Q5T3J3 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC18.99■□□□□ 0.63
LRIF1Q5T3J3 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
LRIF1Q5T3J3 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
LRIF1Q5T3J3 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
LRIF1Q5T3J3 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
LRIF1Q5T3J3 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
LRIF1Q5T3J3 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
LRIF1Q5T3J3 PGM5P4-201ENST00000421970 445 ntBASIC18.99■□□□□ 0.63
LRIF1Q5T3J3 VMO1-204ENST00000441199 741 ntTSL 2 BASIC18.99■□□□□ 0.63
LRIF1Q5T3J3 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
LRIF1Q5T3J3 AL356652.1-201ENST00000615962 565 ntBASIC18.99■□□□□ 0.63
LRIF1Q5T3J3 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
LRIF1Q5T3J3 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC18.99■□□□□ 0.63
LRIF1Q5T3J3 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
LRIF1Q5T3J3 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC18.99■□□□□ 0.63
LRIF1Q5T3J3 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
LRIF1Q5T3J3 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC18.99■□□□□ 0.63
LRIF1Q5T3J3 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
LRIF1Q5T3J3 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC18.99■□□□□ 0.63
LRIF1Q5T3J3 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC18.99■□□□□ 0.63
LRIF1Q5T3J3 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC18.98■□□□□ 0.63
LRIF1Q5T3J3 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
LRIF1Q5T3J3 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
LRIF1Q5T3J3 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
LRIF1Q5T3J3 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
LRIF1Q5T3J3 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC18.98■□□□□ 0.63
LRIF1Q5T3J3 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
LRIF1Q5T3J3 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC18.98■□□□□ 0.63
LRIF1Q5T3J3 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC18.98■□□□□ 0.63
LRIF1Q5T3J3 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
LRIF1Q5T3J3 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
LRIF1Q5T3J3 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC18.98■□□□□ 0.63
LRIF1Q5T3J3 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
LRIF1Q5T3J3 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
LRIF1Q5T3J3 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC18.98■□□□□ 0.63
LRIF1Q5T3J3 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
LRIF1Q5T3J3 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC18.98■□□□□ 0.63
LRIF1Q5T3J3 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC18.98■□□□□ 0.63
LRIF1Q5T3J3 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
LRIF1Q5T3J3 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC18.98■□□□□ 0.63
LRIF1Q5T3J3 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
LRIF1Q5T3J3 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
LRIF1Q5T3J3 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
LRIF1Q5T3J3 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
LRIF1Q5T3J3 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC18.98■□□□□ 0.63
LRIF1Q5T3J3 AC018445.3-201ENST00000624177 1945 ntBASIC18.98■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms