Protein–RNA interactions for Protein: Q53EL6

PDCD4, Programmed cell death protein 4, humanhuman

Known RBP Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD4Q53EL6 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
PDCD4Q53EL6 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
PDCD4Q53EL6 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
PDCD4Q53EL6 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
PDCD4Q53EL6 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
PDCD4Q53EL6 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC19.35■□□□□ 0.69
PDCD4Q53EL6 HYI-206ENST00000372434 1025 ntTSL 5 BASIC19.35■□□□□ 0.69
PDCD4Q53EL6 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
PDCD4Q53EL6 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
PDCD4Q53EL6 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC19.35■□□□□ 0.69
PDCD4Q53EL6 FAM21FP-204ENST00000608637 956 ntBASIC19.35■□□□□ 0.69
PDCD4Q53EL6 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC19.35■□□□□ 0.69
PDCD4Q53EL6 AL158211.5-201ENST00000623583 2518 ntBASIC19.35■□□□□ 0.69
PDCD4Q53EL6 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
PDCD4Q53EL6 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC19.35■□□□□ 0.69
PDCD4Q53EL6 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
PDCD4Q53EL6 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
PDCD4Q53EL6 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC19.35■□□□□ 0.69
PDCD4Q53EL6 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
PDCD4Q53EL6 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
PDCD4Q53EL6 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
PDCD4Q53EL6 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC19.34■□□□□ 0.69
PDCD4Q53EL6 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
PDCD4Q53EL6 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC19.34■□□□□ 0.69
PDCD4Q53EL6 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC19.34■□□□□ 0.69
PDCD4Q53EL6 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
PDCD4Q53EL6 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
PDCD4Q53EL6 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
PDCD4Q53EL6 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC19.34■□□□□ 0.69
PDCD4Q53EL6 SAPCD2P1-201ENST00000395413 1184 ntBASIC19.34■□□□□ 0.69
PDCD4Q53EL6 AC105265.2-201ENST00000467189 838 ntBASIC19.34■□□□□ 0.69
PDCD4Q53EL6 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC19.34■□□□□ 0.69
PDCD4Q53EL6 SLC7A5P1-201ENST00000568957 537 ntBASIC19.34■□□□□ 0.69
PDCD4Q53EL6 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC19.34■□□□□ 0.69
PDCD4Q53EL6 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC19.34■□□□□ 0.69
PDCD4Q53EL6 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC19.34■□□□□ 0.69
PDCD4Q53EL6 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
PDCD4Q53EL6 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
PDCD4Q53EL6 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
PDCD4Q53EL6 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC19.33■□□□□ 0.69
PDCD4Q53EL6 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
PDCD4Q53EL6 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
PDCD4Q53EL6 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
PDCD4Q53EL6 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
PDCD4Q53EL6 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
PDCD4Q53EL6 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
PDCD4Q53EL6 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
PDCD4Q53EL6 CD44-222ENST00000526025 1052 ntTSL 2 BASIC19.33■□□□□ 0.68
PDCD4Q53EL6 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC19.33■□□□□ 0.68
PDCD4Q53EL6 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC19.33■□□□□ 0.68
PDCD4Q53EL6 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
PDCD4Q53EL6 AL691432.2-201ENST00000607222 2038 ntBASIC19.33■□□□□ 0.68
PDCD4Q53EL6 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
PDCD4Q53EL6 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC19.33■□□□□ 0.68
PDCD4Q53EL6 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
PDCD4Q53EL6 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC19.33■□□□□ 0.68
PDCD4Q53EL6 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
PDCD4Q53EL6 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
PDCD4Q53EL6 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
PDCD4Q53EL6 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
PDCD4Q53EL6 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC19.32■□□□□ 0.68
PDCD4Q53EL6 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PDCD4Q53EL6 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC19.32■□□□□ 0.68
PDCD4Q53EL6 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC19.32■□□□□ 0.68
PDCD4Q53EL6 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
PDCD4Q53EL6 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PDCD4Q53EL6 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
PDCD4Q53EL6 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PDCD4Q53EL6 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC19.32■□□□□ 0.68
PDCD4Q53EL6 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC19.32■□□□□ 0.68
PDCD4Q53EL6 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
PDCD4Q53EL6 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PDCD4Q53EL6 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PDCD4Q53EL6 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
PDCD4Q53EL6 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
PDCD4Q53EL6 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PDCD4Q53EL6 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
PDCD4Q53EL6 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PDCD4Q53EL6 BX323043.1-201ENST00000641006 1765 ntBASIC19.32■□□□□ 0.68
PDCD4Q53EL6 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
PDCD4Q53EL6 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC19.31■□□□□ 0.68
PDCD4Q53EL6 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC19.31■□□□□ 0.68
PDCD4Q53EL6 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
PDCD4Q53EL6 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
PDCD4Q53EL6 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PDCD4Q53EL6 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PDCD4Q53EL6 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PDCD4Q53EL6 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PDCD4Q53EL6 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
PDCD4Q53EL6 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
PDCD4Q53EL6 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC19.31■□□□□ 0.68
PDCD4Q53EL6 AC123595.1-201ENST00000440769 1046 ntBASIC19.31■□□□□ 0.68
PDCD4Q53EL6 TESC-206ENST00000541210 936 ntTSL 3 BASIC19.31■□□□□ 0.68
PDCD4Q53EL6 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
PDCD4Q53EL6 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
PDCD4Q53EL6 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC19.31■□□□□ 0.68
PDCD4Q53EL6 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
PDCD4Q53EL6 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
PDCD4Q53EL6 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
PDCD4Q53EL6 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms