Protein–RNA interactions for Protein: Q504U0

C4orf46, Renal cancer differentiation gene 1 protein, humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C4orf46Q504U0 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
C4orf46Q504U0 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC17.09■□□□□ 0.33
C4orf46Q504U0 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC17.09■□□□□ 0.33
C4orf46Q504U0 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC17.09■□□□□ 0.33
C4orf46Q504U0 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
C4orf46Q504U0 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
C4orf46Q504U0 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
C4orf46Q504U0 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
C4orf46Q504U0 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
C4orf46Q504U0 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC17.09■□□□□ 0.33
C4orf46Q504U0 AC010997.5-201ENST00000609182 354 ntBASIC17.09■□□□□ 0.33
C4orf46Q504U0 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC17.09■□□□□ 0.33
C4orf46Q504U0 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
C4orf46Q504U0 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
C4orf46Q504U0 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
C4orf46Q504U0 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC17.09■□□□□ 0.33
C4orf46Q504U0 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
C4orf46Q504U0 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
C4orf46Q504U0 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
C4orf46Q504U0 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC17.09■□□□□ 0.33
C4orf46Q504U0 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC17.09■□□□□ 0.33
C4orf46Q504U0 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
C4orf46Q504U0 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
C4orf46Q504U0 HTR7P1-202ENST00000624664 4411 ntBASIC17.09■□□□□ 0.33
C4orf46Q504U0 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
C4orf46Q504U0 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
C4orf46Q504U0 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC17.08■□□□□ 0.33
C4orf46Q504U0 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC17.08■□□□□ 0.33
C4orf46Q504U0 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
C4orf46Q504U0 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC17.08■□□□□ 0.33
C4orf46Q504U0 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
C4orf46Q504U0 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
C4orf46Q504U0 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
C4orf46Q504U0 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
C4orf46Q504U0 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC17.08■□□□□ 0.32
C4orf46Q504U0 LETM1P2-201ENST00000597330 2178 ntBASIC17.08■□□□□ 0.32
C4orf46Q504U0 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
C4orf46Q504U0 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
C4orf46Q504U0 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
C4orf46Q504U0 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC17.08■□□□□ 0.32
C4orf46Q504U0 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
C4orf46Q504U0 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
C4orf46Q504U0 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
C4orf46Q504U0 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
C4orf46Q504U0 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
C4orf46Q504U0 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
C4orf46Q504U0 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
C4orf46Q504U0 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
C4orf46Q504U0 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
C4orf46Q504U0 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC17.07■□□□□ 0.32
C4orf46Q504U0 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC17.07■□□□□ 0.32
C4orf46Q504U0 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
C4orf46Q504U0 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
C4orf46Q504U0 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC17.07■□□□□ 0.32
C4orf46Q504U0 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC17.07■□□□□ 0.32
C4orf46Q504U0 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
C4orf46Q504U0 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
C4orf46Q504U0 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC17.07■□□□□ 0.32
C4orf46Q504U0 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
C4orf46Q504U0 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC17.07■□□□□ 0.32
C4orf46Q504U0 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC17.07■□□□□ 0.32
C4orf46Q504U0 KRT125P-201ENST00000546827 989 ntBASIC17.07■□□□□ 0.32
C4orf46Q504U0 AC010525.1-201ENST00000585559 441 ntBASIC17.07■□□□□ 0.32
C4orf46Q504U0 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC17.07■□□□□ 0.32
C4orf46Q504U0 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
C4orf46Q504U0 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC17.07■□□□□ 0.32
C4orf46Q504U0 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC17.07■□□□□ 0.32
C4orf46Q504U0 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
C4orf46Q504U0 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
C4orf46Q504U0 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
C4orf46Q504U0 EXOC3-AS1-202ENST00000623673 1663 ntBASIC17.07■□□□□ 0.32
C4orf46Q504U0 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC17.07■□□□□ 0.32
C4orf46Q504U0 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
C4orf46Q504U0 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC17.06■□□□□ 0.32
C4orf46Q504U0 BX005040.4-201ENST00000637145 1518 ntBASIC17.06■□□□□ 0.32
C4orf46Q504U0 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC17.06■□□□□ 0.32
C4orf46Q504U0 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC17.06■□□□□ 0.32
C4orf46Q504U0 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
C4orf46Q504U0 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC17.06■□□□□ 0.32
C4orf46Q504U0 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
C4orf46Q504U0 STAC-204ENST00000457375 1366 ntTSL 2 BASIC17.06■□□□□ 0.32
C4orf46Q504U0 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
C4orf46Q504U0 AL356309.3-201ENST00000624132 1934 ntBASIC17.06■□□□□ 0.32
C4orf46Q504U0 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
C4orf46Q504U0 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
C4orf46Q504U0 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
C4orf46Q504U0 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
C4orf46Q504U0 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC17.06■□□□□ 0.32
C4orf46Q504U0 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC17.06■□□□□ 0.32
C4orf46Q504U0 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC17.06■□□□□ 0.32
C4orf46Q504U0 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
C4orf46Q504U0 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
C4orf46Q504U0 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
C4orf46Q504U0 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC17.06■□□□□ 0.32
C4orf46Q504U0 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
C4orf46Q504U0 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
C4orf46Q504U0 POLI-202ENST00000406285 2030 ntTSL 2 BASIC17.06■□□□□ 0.32
C4orf46Q504U0 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
C4orf46Q504U0 AC093503.3-201ENST00000624917 2352 ntBASIC17.06■□□□□ 0.32
C4orf46Q504U0 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms