Protein–RNA interactions for Protein: Q495M9

USH1G, Usher syndrome type-1G protein, humanhuman

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH1GQ495M9 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
USH1GQ495M9 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC23.19■■□□□ 1.3
USH1GQ495M9 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC23.19■■□□□ 1.3
USH1GQ495M9 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC23.19■■□□□ 1.3
USH1GQ495M9 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
USH1GQ495M9 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC23.19■■□□□ 1.3
USH1GQ495M9 FAM197Y4-202ENST00000622692 608 ntBASIC23.19■■□□□ 1.3
USH1GQ495M9 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
USH1GQ495M9 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC23.19■■□□□ 1.3
USH1GQ495M9 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
USH1GQ495M9 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
USH1GQ495M9 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
USH1GQ495M9 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC23.18■■□□□ 1.3
USH1GQ495M9 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC23.18■■□□□ 1.3
USH1GQ495M9 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC23.18■■□□□ 1.3
USH1GQ495M9 HES2-206ENST00000489730 730 ntTSL 2 BASIC23.18■■□□□ 1.3
USH1GQ495M9 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC23.18■■□□□ 1.3
USH1GQ495M9 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC23.18■■□□□ 1.3
USH1GQ495M9 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC23.18■■□□□ 1.3
USH1GQ495M9 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
USH1GQ495M9 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC23.18■■□□□ 1.3
USH1GQ495M9 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC23.18■■□□□ 1.3
USH1GQ495M9 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
USH1GQ495M9 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
USH1GQ495M9 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC23.18■■□□□ 1.3
USH1GQ495M9 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC23.18■■□□□ 1.3
USH1GQ495M9 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
USH1GQ495M9 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
USH1GQ495M9 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
USH1GQ495M9 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
USH1GQ495M9 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC23.17■■□□□ 1.3
USH1GQ495M9 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC23.17■■□□□ 1.3
USH1GQ495M9 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
USH1GQ495M9 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC23.17■■□□□ 1.3
USH1GQ495M9 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
USH1GQ495M9 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
USH1GQ495M9 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
USH1GQ495M9 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
USH1GQ495M9 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC23.17■■□□□ 1.3
USH1GQ495M9 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC23.17■■□□□ 1.3
USH1GQ495M9 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
USH1GQ495M9 RHOD-202ENST00000532559 538 ntTSL 3 BASIC23.17■■□□□ 1.3
USH1GQ495M9 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC23.17■■□□□ 1.3
USH1GQ495M9 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC23.17■■□□□ 1.3
USH1GQ495M9 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
USH1GQ495M9 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC23.17■■□□□ 1.3
USH1GQ495M9 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC23.17■■□□□ 1.3
USH1GQ495M9 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
USH1GQ495M9 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC23.16■■□□□ 1.3
USH1GQ495M9 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
USH1GQ495M9 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
USH1GQ495M9 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
USH1GQ495M9 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC23.16■■□□□ 1.3
USH1GQ495M9 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
USH1GQ495M9 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC23.16■■□□□ 1.3
USH1GQ495M9 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC23.16■■□□□ 1.3
USH1GQ495M9 RNF121-214ENST00000533380 870 ntTSL 3 BASIC23.16■■□□□ 1.3
USH1GQ495M9 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC23.16■■□□□ 1.3
USH1GQ495M9 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC23.16■■□□□ 1.3
USH1GQ495M9 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC23.16■■□□□ 1.3
USH1GQ495M9 AC124283.5-201ENST00000624661 1809 ntBASIC23.16■■□□□ 1.3
USH1GQ495M9 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC23.16■■□□□ 1.3
USH1GQ495M9 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC23.16■■□□□ 1.3
USH1GQ495M9 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
USH1GQ495M9 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
USH1GQ495M9 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
USH1GQ495M9 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC23.16■■□□□ 1.3
USH1GQ495M9 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC23.16■■□□□ 1.3
USH1GQ495M9 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
USH1GQ495M9 BID-203ENST00000399765 1879 ntTSL 2 BASIC23.15■■□□□ 1.3
USH1GQ495M9 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC23.15■■□□□ 1.3
USH1GQ495M9 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC23.15■■□□□ 1.3
USH1GQ495M9 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC23.15■■□□□ 1.3
USH1GQ495M9 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
USH1GQ495M9 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC23.15■■□□□ 1.3
USH1GQ495M9 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
USH1GQ495M9 BAALC-201ENST00000297574 801 ntTSL 3 BASIC23.15■■□□□ 1.3
USH1GQ495M9 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
USH1GQ495M9 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC23.15■■□□□ 1.3
USH1GQ495M9 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC23.15■■□□□ 1.3
USH1GQ495M9 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
USH1GQ495M9 AC023632.3-201ENST00000521633 145 ntBASIC23.15■■□□□ 1.3
USH1GQ495M9 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
USH1GQ495M9 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
USH1GQ495M9 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC23.15■■□□□ 1.3
USH1GQ495M9 PALM-208ENST00000592155 2272 ntTSL 4 BASIC23.15■■□□□ 1.3
USH1GQ495M9 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC23.14■■□□□ 1.3
USH1GQ495M9 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC23.14■■□□□ 1.3
USH1GQ495M9 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC23.14■■□□□ 1.3
USH1GQ495M9 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC23.14■■□□□ 1.3
USH1GQ495M9 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC23.14■■□□□ 1.3
USH1GQ495M9 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
USH1GQ495M9 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC23.14■■□□□ 1.3
USH1GQ495M9 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC23.14■■□□□ 1.29
USH1GQ495M9 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC23.14■■□□□ 1.29
USH1GQ495M9 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC23.14■■□□□ 1.29
USH1GQ495M9 AL023875.1-201ENST00000640777 796 ntBASIC23.14■■□□□ 1.29
USH1GQ495M9 AP006294.2-201ENST00000641667 209 ntBASIC23.14■■□□□ 1.29
USH1GQ495M9 PTBP1P-201ENST00000554374 1601 ntBASIC23.14■■□□□ 1.29
USH1GQ495M9 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
Retrieved 100 of 98,524 protein–RNA pairs in 14.8 ms