Protein–RNA interactions for Protein: Q2NKJ3

CTC1, CST complex subunit CTC1, humanhuman

Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1Q2NKJ3 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC21.62■■□□□ 1.05
CTC1Q2NKJ3 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC21.62■■□□□ 1.05
CTC1Q2NKJ3 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC21.62■■□□□ 1.05
CTC1Q2NKJ3 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC21.62■■□□□ 1.05
CTC1Q2NKJ3 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC21.62■■□□□ 1.05
CTC1Q2NKJ3 AC026471.5-201ENST00000615068 467 ntBASIC21.62■■□□□ 1.05
CTC1Q2NKJ3 AC006557.6-201ENST00000623071 864 ntBASIC21.62■■□□□ 1.05
CTC1Q2NKJ3 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC21.62■■□□□ 1.05
CTC1Q2NKJ3 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC21.62■■□□□ 1.05
CTC1Q2NKJ3 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC21.62■■□□□ 1.05
CTC1Q2NKJ3 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
CTC1Q2NKJ3 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CTC1Q2NKJ3 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC21.62■■□□□ 1.05
CTC1Q2NKJ3 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
CTC1Q2NKJ3 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC21.62■■□□□ 1.05
CTC1Q2NKJ3 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CTC1Q2NKJ3 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC21.61■■□□□ 1.05
CTC1Q2NKJ3 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC21.61■■□□□ 1.05
CTC1Q2NKJ3 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC21.61■■□□□ 1.05
CTC1Q2NKJ3 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CTC1Q2NKJ3 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CTC1Q2NKJ3 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CTC1Q2NKJ3 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC21.61■■□□□ 1.05
CTC1Q2NKJ3 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CTC1Q2NKJ3 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC21.61■■□□□ 1.05
CTC1Q2NKJ3 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
CTC1Q2NKJ3 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC21.61■■□□□ 1.05
CTC1Q2NKJ3 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CTC1Q2NKJ3 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
CTC1Q2NKJ3 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CTC1Q2NKJ3 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC21.61■■□□□ 1.05
CTC1Q2NKJ3 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC21.61■■□□□ 1.05
CTC1Q2NKJ3 AP003071.4-201ENST00000562276 1284 ntBASIC21.61■■□□□ 1.05
CTC1Q2NKJ3 AL590326.2-201ENST00000625139 305 ntBASIC21.61■■□□□ 1.05
CTC1Q2NKJ3 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CTC1Q2NKJ3 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CTC1Q2NKJ3 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CTC1Q2NKJ3 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CTC1Q2NKJ3 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CTC1Q2NKJ3 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CTC1Q2NKJ3 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CTC1Q2NKJ3 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC21.61■■□□□ 1.05
CTC1Q2NKJ3 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CTC1Q2NKJ3 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CTC1Q2NKJ3 NARF-205ENST00000412079 1760 ntTSL 5 BASIC21.61■■□□□ 1.05
CTC1Q2NKJ3 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC21.61■■□□□ 1.05
CTC1Q2NKJ3 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC21.61■■□□□ 1.05
CTC1Q2NKJ3 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC21.6■■□□□ 1.05
CTC1Q2NKJ3 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
CTC1Q2NKJ3 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC21.6■■□□□ 1.05
CTC1Q2NKJ3 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
CTC1Q2NKJ3 MMP23A-201ENST00000234610 1017 ntBASIC21.6■■□□□ 1.05
CTC1Q2NKJ3 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
CTC1Q2NKJ3 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC21.6■■□□□ 1.05
CTC1Q2NKJ3 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC21.6■■□□□ 1.05
CTC1Q2NKJ3 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CTC1Q2NKJ3 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC21.6■■□□□ 1.05
CTC1Q2NKJ3 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC21.6■■□□□ 1.05
CTC1Q2NKJ3 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC21.6■■□□□ 1.05
CTC1Q2NKJ3 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC21.6■■□□□ 1.05
CTC1Q2NKJ3 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
CTC1Q2NKJ3 AC092865.7-201ENST00000641832 219 ntBASIC21.6■■□□□ 1.05
CTC1Q2NKJ3 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CTC1Q2NKJ3 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC21.59■■□□□ 1.05
CTC1Q2NKJ3 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
CTC1Q2NKJ3 AL121603.2-201ENST00000557373 2117 ntBASIC21.59■■□□□ 1.05
CTC1Q2NKJ3 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC21.59■■□□□ 1.05
CTC1Q2NKJ3 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
CTC1Q2NKJ3 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC21.59■■□□□ 1.05
CTC1Q2NKJ3 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CTC1Q2NKJ3 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC21.59■■□□□ 1.05
CTC1Q2NKJ3 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CTC1Q2NKJ3 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
CTC1Q2NKJ3 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
CTC1Q2NKJ3 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
CTC1Q2NKJ3 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC21.59■■□□□ 1.05
CTC1Q2NKJ3 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
CTC1Q2NKJ3 SAPCD2P4-201ENST00000424595 1171 ntBASIC21.59■■□□□ 1.05
CTC1Q2NKJ3 GRAP-204ENST00000573099 846 ntTSL 3 BASIC21.59■■□□□ 1.05
CTC1Q2NKJ3 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CTC1Q2NKJ3 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC21.59■■□□□ 1.05
CTC1Q2NKJ3 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC21.59■■□□□ 1.05
CTC1Q2NKJ3 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CTC1Q2NKJ3 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
CTC1Q2NKJ3 AC116050.2-201ENST00000612102 1779 ntBASIC21.59■■□□□ 1.05
CTC1Q2NKJ3 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
CTC1Q2NKJ3 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
CTC1Q2NKJ3 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
CTC1Q2NKJ3 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
CTC1Q2NKJ3 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC21.58■■□□□ 1.05
CTC1Q2NKJ3 AC087633.2-202ENST00000565166 1439 ntBASIC21.58■■□□□ 1.05
CTC1Q2NKJ3 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
CTC1Q2NKJ3 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC21.58■■□□□ 1.05
CTC1Q2NKJ3 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC21.58■■□□□ 1.05
CTC1Q2NKJ3 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC21.58■■□□□ 1.05
CTC1Q2NKJ3 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
CTC1Q2NKJ3 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC21.58■■□□□ 1.05
CTC1Q2NKJ3 BRWD1-AS2-201ENST00000603064 1028 ntBASIC21.58■■□□□ 1.05
CTC1Q2NKJ3 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
CTC1Q2NKJ3 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC21.58■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms