Protein–RNA interactions for Protein: Q2KHR2

RFX7, DNA-binding protein RFX7, humanhuman

Predictions only

Length 1,363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX7Q2KHR2 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC24.48■■□□□ 1.51
RFX7Q2KHR2 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
RFX7Q2KHR2 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC24.48■■□□□ 1.51
RFX7Q2KHR2 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC24.48■■□□□ 1.51
RFX7Q2KHR2 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC24.48■■□□□ 1.51
RFX7Q2KHR2 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC24.48■■□□□ 1.51
RFX7Q2KHR2 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC24.48■■□□□ 1.51
RFX7Q2KHR2 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC24.48■■□□□ 1.51
RFX7Q2KHR2 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC24.48■■□□□ 1.51
RFX7Q2KHR2 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC24.48■■□□□ 1.51
RFX7Q2KHR2 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC24.48■■□□□ 1.51
RFX7Q2KHR2 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
RFX7Q2KHR2 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC24.47■■□□□ 1.51
RFX7Q2KHR2 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC24.47■■□□□ 1.51
RFX7Q2KHR2 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC24.47■■□□□ 1.51
RFX7Q2KHR2 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
RFX7Q2KHR2 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC24.47■■□□□ 1.51
RFX7Q2KHR2 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC24.47■■□□□ 1.51
RFX7Q2KHR2 NXN-202ENST00000537628 1340 ntTSL 3 BASIC24.47■■□□□ 1.51
RFX7Q2KHR2 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC24.47■■□□□ 1.51
RFX7Q2KHR2 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC24.47■■□□□ 1.51
RFX7Q2KHR2 AL162377.1-201ENST00000618844 1793 ntBASIC24.46■■□□□ 1.51
RFX7Q2KHR2 DET1-207ENST00000564406 2315 ntTSL 2 BASIC24.46■■□□□ 1.51
RFX7Q2KHR2 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
RFX7Q2KHR2 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC24.46■■□□□ 1.51
RFX7Q2KHR2 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
RFX7Q2KHR2 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
RFX7Q2KHR2 HES2-205ENST00000487437 968 ntTSL 3 BASIC24.46■■□□□ 1.51
RFX7Q2KHR2 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC24.46■■□□□ 1.51
RFX7Q2KHR2 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC24.46■■□□□ 1.51
RFX7Q2KHR2 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC24.46■■□□□ 1.51
RFX7Q2KHR2 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
RFX7Q2KHR2 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC24.46■■□□□ 1.51
RFX7Q2KHR2 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC24.46■■□□□ 1.51
RFX7Q2KHR2 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
RFX7Q2KHR2 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC24.46■■□□□ 1.51
RFX7Q2KHR2 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC24.46■■□□□ 1.51
RFX7Q2KHR2 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.51
RFX7Q2KHR2 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC24.45■■□□□ 1.51
RFX7Q2KHR2 PEX7-202ENST00000367756 680 ntTSL 3 BASIC24.45■■□□□ 1.5
RFX7Q2KHR2 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC24.45■■□□□ 1.5
RFX7Q2KHR2 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC24.45■■□□□ 1.5
RFX7Q2KHR2 OR2A1-AS1-207ENST00000486094 819 ntBASIC24.45■■□□□ 1.5
RFX7Q2KHR2 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC24.45■■□□□ 1.5
RFX7Q2KHR2 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC24.45■■□□□ 1.5
RFX7Q2KHR2 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
RFX7Q2KHR2 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC24.44■■□□□ 1.5
RFX7Q2KHR2 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC24.44■■□□□ 1.5
RFX7Q2KHR2 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC24.44■■□□□ 1.5
RFX7Q2KHR2 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC24.44■■□□□ 1.5
RFX7Q2KHR2 BAALC-201ENST00000297574 801 ntTSL 3 BASIC24.44■■□□□ 1.5
RFX7Q2KHR2 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC24.44■■□□□ 1.5
RFX7Q2KHR2 AL596275.1-201ENST00000423464 877 ntBASIC24.44■■□□□ 1.5
RFX7Q2KHR2 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC24.44■■□□□ 1.5
RFX7Q2KHR2 C2orf69P4-201ENST00000565394 541 ntBASIC24.44■■□□□ 1.5
RFX7Q2KHR2 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC24.44■■□□□ 1.5
RFX7Q2KHR2 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC24.44■■□□□ 1.5
RFX7Q2KHR2 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC24.44■■□□□ 1.5
RFX7Q2KHR2 PTBP1P-201ENST00000554374 1601 ntBASIC24.44■■□□□ 1.5
RFX7Q2KHR2 AL157384.1-201ENST00000445995 2473 ntBASIC24.44■■□□□ 1.5
RFX7Q2KHR2 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
RFX7Q2KHR2 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC24.44■■□□□ 1.5
RFX7Q2KHR2 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC24.44■■□□□ 1.5
RFX7Q2KHR2 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
RFX7Q2KHR2 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
RFX7Q2KHR2 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC24.44■■□□□ 1.5
RFX7Q2KHR2 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC24.43■■□□□ 1.5
RFX7Q2KHR2 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
RFX7Q2KHR2 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC24.43■■□□□ 1.5
RFX7Q2KHR2 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC24.43■■□□□ 1.5
RFX7Q2KHR2 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC24.43■■□□□ 1.5
RFX7Q2KHR2 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
RFX7Q2KHR2 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
RFX7Q2KHR2 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
RFX7Q2KHR2 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
RFX7Q2KHR2 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC24.43■■□□□ 1.5
RFX7Q2KHR2 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
RFX7Q2KHR2 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC24.43■■□□□ 1.5
RFX7Q2KHR2 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
RFX7Q2KHR2 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC24.43■■□□□ 1.5
RFX7Q2KHR2 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
RFX7Q2KHR2 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC24.42■■□□□ 1.5
RFX7Q2KHR2 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC24.42■■□□□ 1.5
RFX7Q2KHR2 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC24.42■■□□□ 1.5
RFX7Q2KHR2 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC24.42■■□□□ 1.5
RFX7Q2KHR2 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC24.42■■□□□ 1.5
RFX7Q2KHR2 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC24.42■■□□□ 1.5
RFX7Q2KHR2 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
RFX7Q2KHR2 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC24.42■■□□□ 1.5
RFX7Q2KHR2 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
RFX7Q2KHR2 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC24.42■■□□□ 1.5
RFX7Q2KHR2 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC24.42■■□□□ 1.5
RFX7Q2KHR2 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
RFX7Q2KHR2 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
RFX7Q2KHR2 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC24.42■■□□□ 1.5
RFX7Q2KHR2 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
RFX7Q2KHR2 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC24.42■■□□□ 1.5
RFX7Q2KHR2 AP006294.2-201ENST00000641667 209 ntBASIC24.42■■□□□ 1.5
RFX7Q2KHR2 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
RFX7Q2KHR2 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC24.41■■□□□ 1.5
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms