Protein–RNA interactions for Protein: Q29RF7

PDS5A, Sister chromatid cohesion protein PDS5 homolog A, humanhuman

Known RBP Predictions only

Length 1,337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDS5AQ29RF7 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
PDS5AQ29RF7 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
PDS5AQ29RF7 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
PDS5AQ29RF7 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
PDS5AQ29RF7 AL596275.1-201ENST00000423464 877 ntBASIC24.32■■□□□ 1.48
PDS5AQ29RF7 AC012618.2-201ENST00000428058 849 ntBASIC24.32■■□□□ 1.48
PDS5AQ29RF7 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC24.32■■□□□ 1.48
PDS5AQ29RF7 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC24.32■■□□□ 1.48
PDS5AQ29RF7 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC24.32■■□□□ 1.48
PDS5AQ29RF7 AC110285.5-201ENST00000611501 352 ntBASIC24.32■■□□□ 1.48
PDS5AQ29RF7 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
PDS5AQ29RF7 AC007225.1-201ENST00000566331 1836 ntBASIC24.32■■□□□ 1.48
PDS5AQ29RF7 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC24.32■■□□□ 1.48
PDS5AQ29RF7 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC24.31■■□□□ 1.48
PDS5AQ29RF7 KRT8P20-201ENST00000423953 1409 ntBASIC24.31■■□□□ 1.48
PDS5AQ29RF7 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC24.31■■□□□ 1.48
PDS5AQ29RF7 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC24.31■■□□□ 1.48
PDS5AQ29RF7 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC24.31■■□□□ 1.48
PDS5AQ29RF7 H19-201ENST00000411754 1788 ntTSL 5 BASIC24.31■■□□□ 1.48
PDS5AQ29RF7 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC24.31■■□□□ 1.48
PDS5AQ29RF7 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC24.31■■□□□ 1.48
PDS5AQ29RF7 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
PDS5AQ29RF7 TREX2-204ENST00000370212 861 ntTSL 5 BASIC24.31■■□□□ 1.48
PDS5AQ29RF7 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC24.31■■□□□ 1.48
PDS5AQ29RF7 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC24.31■■□□□ 1.48
PDS5AQ29RF7 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
PDS5AQ29RF7 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC24.31■■□□□ 1.48
PDS5AQ29RF7 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC24.31■■□□□ 1.48
PDS5AQ29RF7 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC24.31■■□□□ 1.48
PDS5AQ29RF7 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC24.31■■□□□ 1.48
PDS5AQ29RF7 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC24.3■■□□□ 1.48
PDS5AQ29RF7 BID-203ENST00000399765 1879 ntTSL 2 BASIC24.3■■□□□ 1.48
PDS5AQ29RF7 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC24.3■■□□□ 1.48
PDS5AQ29RF7 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
PDS5AQ29RF7 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC24.3■■□□□ 1.48
PDS5AQ29RF7 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC24.3■■□□□ 1.48
PDS5AQ29RF7 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
PDS5AQ29RF7 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC24.3■■□□□ 1.48
PDS5AQ29RF7 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC24.3■■□□□ 1.48
PDS5AQ29RF7 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC24.3■■□□□ 1.48
PDS5AQ29RF7 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
PDS5AQ29RF7 AL121906.2-201ENST00000621597 723 ntBASIC24.3■■□□□ 1.48
PDS5AQ29RF7 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC24.3■■□□□ 1.48
PDS5AQ29RF7 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC24.3■■□□□ 1.48
PDS5AQ29RF7 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC24.3■■□□□ 1.48
PDS5AQ29RF7 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
PDS5AQ29RF7 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC24.3■■□□□ 1.48
PDS5AQ29RF7 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC24.3■■□□□ 1.48
PDS5AQ29RF7 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
PDS5AQ29RF7 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
PDS5AQ29RF7 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC24.29■■□□□ 1.48
PDS5AQ29RF7 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC24.29■■□□□ 1.48
PDS5AQ29RF7 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
PDS5AQ29RF7 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
PDS5AQ29RF7 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
PDS5AQ29RF7 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC24.29■■□□□ 1.48
PDS5AQ29RF7 KRASP1-201ENST00000407852 552 ntBASIC24.29■■□□□ 1.48
PDS5AQ29RF7 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC24.29■■□□□ 1.48
PDS5AQ29RF7 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
PDS5AQ29RF7 Z99916.2-201ENST00000604037 246 ntBASIC24.29■■□□□ 1.48
PDS5AQ29RF7 AC005229.4-201ENST00000610085 2198 ntBASIC24.28■■□□□ 1.48
PDS5AQ29RF7 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
PDS5AQ29RF7 FP700111.2-201ENST00000619190 1892 ntBASIC24.28■■□□□ 1.48
PDS5AQ29RF7 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC24.28■■□□□ 1.48
PDS5AQ29RF7 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC24.28■■□□□ 1.48
PDS5AQ29RF7 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
PDS5AQ29RF7 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
PDS5AQ29RF7 PRKY-204ENST00000533551 1019 ntBASIC24.28■■□□□ 1.48
PDS5AQ29RF7 AC233702.5-201ENST00000584107 538 ntBASIC24.28■■□□□ 1.48
PDS5AQ29RF7 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC24.28■■□□□ 1.48
PDS5AQ29RF7 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC24.28■■□□□ 1.48
PDS5AQ29RF7 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC24.28■■□□□ 1.48
PDS5AQ29RF7 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC24.27■■□□□ 1.48
PDS5AQ29RF7 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC24.27■■□□□ 1.48
PDS5AQ29RF7 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
PDS5AQ29RF7 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC24.27■■□□□ 1.48
PDS5AQ29RF7 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC24.27■■□□□ 1.48
PDS5AQ29RF7 AC124283.5-201ENST00000624661 1809 ntBASIC24.27■■□□□ 1.48
PDS5AQ29RF7 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
PDS5AQ29RF7 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC24.27■■□□□ 1.48
PDS5AQ29RF7 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
PDS5AQ29RF7 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC24.27■■□□□ 1.48
PDS5AQ29RF7 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC24.27■■□□□ 1.48
PDS5AQ29RF7 Six3os1_6.1-201ENST00000620790 196 ntBASIC24.27■■□□□ 1.48
PDS5AQ29RF7 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
PDS5AQ29RF7 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
PDS5AQ29RF7 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC24.27■■□□□ 1.48
PDS5AQ29RF7 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC24.26■■□□□ 1.47
PDS5AQ29RF7 KRT8P17-201ENST00000453110 1448 ntBASIC24.26■■□□□ 1.47
PDS5AQ29RF7 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC24.26■■□□□ 1.47
PDS5AQ29RF7 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC24.26■■□□□ 1.47
PDS5AQ29RF7 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC24.26■■□□□ 1.47
PDS5AQ29RF7 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC24.26■■□□□ 1.47
PDS5AQ29RF7 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC24.26■■□□□ 1.47
PDS5AQ29RF7 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC24.26■■□□□ 1.47
PDS5AQ29RF7 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
PDS5AQ29RF7 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC24.26■■□□□ 1.47
PDS5AQ29RF7 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC24.26■■□□□ 1.47
PDS5AQ29RF7 RARRES2P10-201ENST00000564312 460 ntBASIC24.26■■□□□ 1.47
PDS5AQ29RF7 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC24.26■■□□□ 1.47
Retrieved 100 of 98,524 protein–RNA pairs in 41.4 ms