Protein–RNA interactions for Protein: Q08685

CLP1, mRNA cleavage and polyadenylation factor CLP1, yeastyeast

Predicted RBP Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
CLP1Q08685 ROM2YLR371W 4071 nt1.33□□□□□ -2.2
CLP1Q08685 ZRG8YER033C 3231 nt1.32□□□□□ -2.2
CLP1Q08685 KAP122YGL016W 3246 nt1.32□□□□□ -2.2
CLP1Q08685 MNL2YLR057W 2550 nt1.32□□□□□ -2.2
CLP1Q08685 YDR157WYDR157W 402 nt1.32□□□□□ -2.2
CLP1Q08685 YDR269CYDR269C 324 nt1.32□□□□□ -2.2
CLP1Q08685 tV(UAC)BtV(UAC)B 74 nt1.32□□□□□ -2.2
CLP1Q08685 tV(UAC)DtV(UAC)D 74 nt1.32□□□□□ -2.2
CLP1Q08685 YBL071CYBL071C 309 nt1.32□□□□□ -2.2
CLP1Q08685 DIE2YGR227W 1578 nt1.32□□□□□ -2.2
CLP1Q08685 PEP3YLR148W 2757 nt1.32□□□□□ -2.2
CLP1Q08685 SPO23YBR250W 1572 nt1.31□□□□□ -2.2
CLP1Q08685 YDR169C-AYDR169C-A 150 nt1.31□□□□□ -2.2
CLP1Q08685 YHL009W-AYHL009W-A 1242 nt1.31□□□□□ -2.2
CLP1Q08685 YOR293C-AYOR293C-A 150 nt1.31□□□□□ -2.2
CLP1Q08685 YSY6YBR162W-A 198 nt1.31□□□□□ -2.2
CLP1Q08685 YBR285WYBR285W 435 nt1.31□□□□□ -2.2
CLP1Q08685 SNF5YBR289W 2718 nt1.31□□□□□ -2.2
CLP1Q08685 RPS24BYIL069C 408 nt1.3□□□□□ -2.2
CLP1Q08685 YPR099CYPR099C 357 nt1.3□□□□□ -2.2
CLP1Q08685 SMY1YKL079W 1971 nt1.3□□□□□ -2.2
CLP1Q08685 YBR184WYBR184W 1572 nt1.3□□□□□ -2.2
CLP1Q08685 MSH5YDL154W 2706 nt1.29□□□□□ -2.2
CLP1Q08685 YCR102W-AYCR102W-A 198 nt1.29□□□□□ -2.2
CLP1Q08685 YDR118W-AYDR118W-A 117 nt1.29□□□□□ -2.2
CLP1Q08685 YHR138CYHR138C 345 nt1.29□□□□□ -2.2
CLP1Q08685 YLR434CYLR434C 384 nt1.29□□□□□ -2.2
CLP1Q08685 YML009C-AYML009C-A 327 nt1.29□□□□□ -2.2
CLP1Q08685 MRPL50YNR022C 420 nt1.29□□□□□ -2.2
CLP1Q08685 NUP120YKL057C 3114 nt1.29□□□□□ -2.2
CLP1Q08685 HIR3YJR140C 4947 nt1.29□□□□□ -2.2
CLP1Q08685 YPL185WYPL185W 396 nt1.28□□□□□ -2.2
CLP1Q08685 PAN3YKL025C 2040 nt1.28□□□□□ -2.2
CLP1Q08685 YLR419WYLR419W 4308 nt1.27□□□□□ -2.21
CLP1Q08685 MUK1YPL070W 1839 nt1.27□□□□□ -2.21
CLP1Q08685 YCR043CYCR043C 384 nt1.27□□□□□ -2.21
CLP1Q08685 YDL152WYDL152W 366 nt1.27□□□□□ -2.21
CLP1Q08685 RPL42BYHR141C 321 nt1.27□□□□□ -2.21
CLP1Q08685 RPL42AYNL162W 321 nt1.27□□□□□ -2.21
CLP1Q08685 YOR053WYOR053W 342 nt1.27□□□□□ -2.21
CLP1Q08685 CDC25YLR310C 4770 nt1.26□□□□□ -2.21
CLP1Q08685 YGL239CYGL239C 315 nt1.26□□□□□ -2.21
CLP1Q08685 PGA1YNL158W 597 nt1.26□□□□□ -2.21
CLP1Q08685 YPR170W-AYPR170W-A 186 nt1.26□□□□□ -2.21
CLP1Q08685 YPR117WYPR117W 7470 nt1.26□□□□□ -2.21
CLP1Q08685 ALK1YGL021W 2283 nt1.26□□□□□ -2.21
CLP1Q08685 DAS1YJL149W 1992 nt1.25□□□□□ -2.21
CLP1Q08685 YNL284C-BYNL284C-B 5268 nt1.25□□□□□ -2.21
CLP1Q08685 YGR250CYGR250C 2346 nt1.25□□□□□ -2.21
CLP1Q08685 HMRA1YCR097W 381 nt1.25□□□□□ -2.21
CLP1Q08685 WIP1YDR374W-A 270 nt1.25□□□□□ -2.21
CLP1Q08685 YIL066W-AYIL066W-A 444 nt1.25□□□□□ -2.21
CLP1Q08685 VPS55YJR044C 423 nt1.25□□□□□ -2.21
CLP1Q08685 CGI121YML036W 546 nt1.25□□□□□ -2.21
CLP1Q08685 APL2YKL135C 2181 nt1.25□□□□□ -2.21
CLP1Q08685 SEC3YER008C 4011 nt1.25□□□□□ -2.21
CLP1Q08685 TOF2YKR010C 2316 nt1.24□□□□□ -2.21
CLP1Q08685 SIP4YJL089W 2490 nt1.24□□□□□ -2.21
CLP1Q08685 PHS1YJL097W 654 nt1.24□□□□□ -2.21
CLP1Q08685 YKL183C-AYKL183C-A 213 nt1.24□□□□□ -2.21
CLP1Q08685 YAL068W-AYAL068W-A 255 nt1.24□□□□□ -2.21
CLP1Q08685 YAR047CYAR047C 321 nt1.24□□□□□ -2.21
CLP1Q08685 BSC3YLR465C 309 nt1.24□□□□□ -2.21
CLP1Q08685 YPL182CYPL182C 384 nt1.24□□□□□ -2.21
CLP1Q08685 YDL011CYDL011C 324 nt1.23□□□□□ -2.21
CLP1Q08685 YLR334CYLR334C 381 nt1.23□□□□□ -2.21
CLP1Q08685 HCH1YNL281W 462 nt1.23□□□□□ -2.21
CLP1Q08685 RPL32YBL092W 393 nt1.23□□□□□ -2.21
CLP1Q08685 YPR012WYPR012W 255 nt1.23□□□□□ -2.21
CLP1Q08685 APL1YJR005W 2103 nt1.22□□□□□ -2.21
CLP1Q08685 AZF1YOR113W 2745 nt1.22□□□□□ -2.21
CLP1Q08685 YER137W-AYER137W-A 306 nt1.22□□□□□ -2.21
CLP1Q08685 RPL26AYLR344W 384 nt1.22□□□□□ -2.21
CLP1Q08685 RPL9BYNL067W 576 nt1.22□□□□□ -2.21
CLP1Q08685 YNL114CYNL114C 372 nt1.22□□□□□ -2.21
CLP1Q08685 YCS4YLR272C 3531 nt1.22□□□□□ -2.21
CLP1Q08685 SMC4YLR086W 4257 nt1.22□□□□□ -2.21
CLP1Q08685 SPT7YBR081C 3999 nt1.22□□□□□ -2.21
CLP1Q08685 PCF11YDR228C 1881 nt1.21□□□□□ -2.22
CLP1Q08685 YAP6YDR259C 1152 nt1.21□□□□□ -2.22
CLP1Q08685 TIM13YGR181W 318 nt1.21□□□□□ -2.22
CLP1Q08685 YHR028W-AYHR028W-A 321 nt1.21□□□□□ -2.22
CLP1Q08685 YPL261CYPL261C 309 nt1.21□□□□□ -2.22
CLP1Q08685 YCL046WYCL046W 324 nt1.21□□□□□ -2.22
CLP1Q08685 OSH6YKR003W 1347 nt1.2□□□□□ -2.22
CLP1Q08685 snR56snR56 88 nt1.2□□□□□ -2.22
CLP1Q08685 YDR008CYDR008C 351 nt1.2□□□□□ -2.22
CLP1Q08685 ATG31YDR022C 591 nt1.2□□□□□ -2.22
CLP1Q08685 YJL020W-AYJL020W-A 258 nt1.2□□□□□ -2.22
CLP1Q08685 YJL022WYJL022W 309 nt1.2□□□□□ -2.22
CLP1Q08685 PAU18YLL064C 363 nt1.2□□□□□ -2.22
CLP1Q08685 PAU6YNR076W 363 nt1.2□□□□□ -2.22
CLP1Q08685 SWI5YDR146C 2130 nt1.19□□□□□ -2.22
CLP1Q08685 YER088C-AYER088C-A 324 nt1.19□□□□□ -2.22
CLP1Q08685 HIT1YJR055W 495 nt1.19□□□□□ -2.22
CLP1Q08685 RPS27AYKL156W 249 nt1.19□□□□□ -2.22
CLP1Q08685 ISF1YMR081C 1017 nt1.19□□□□□ -2.22
CLP1Q08685 MAK10YEL053C 2202 nt1.18□□□□□ -2.22
CLP1Q08685 YKL083WYKL083W 615 nt1.18□□□□□ -2.22
CLP1Q08685 YOR121CYOR121C 306 nt1.18□□□□□ -2.22
Retrieved 100 of 7,029 protein–RNA pairs in 18.4 ms