Protein–RNA interactions for Protein: Q04377

LCD1, DNA damage checkpoint protein LCD1, yeastyeast

Predictions only

Length 747 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
LCD1Q04377 LCD1YDR499W 2244 nt2.6□□□□□ -1.99
LCD1Q04377 TFC3YAL001C 3483 nt2.6□□□□□ -1.99
LCD1Q04377 YNL028WYNL028W 318 nt2.6□□□□□ -1.99
LCD1Q04377 YOR394C-AYOR394C-A 168 nt2.6□□□□□ -1.99
LCD1Q04377 PDR11YIL013C 4236 nt2.6□□□□□ -1.99
LCD1Q04377 IRR1YIL026C 3453 nt2.6□□□□□ -1.99
LCD1Q04377 UBP15YMR304W 3693 nt2.6□□□□□ -1.99
LCD1Q04377 MMS22YLR320W 4365 nt2.59□□□□□ -1.99
LCD1Q04377 SWI6YLR182W 2412 nt2.59□□□□□ -1.99
LCD1Q04377 NPR2YEL062W 1848 nt2.59□□□□□ -1.99
LCD1Q04377 ORC2YBR060C 1863 nt2.59□□□□□ -1.99
LCD1Q04377 YDR286CYDR286C 345 nt2.59□□□□□ -1.99
LCD1Q04377 YLR294CYLR294C 330 nt2.59□□□□□ -1.99
LCD1Q04377 YMR230W-AYMR230W-A 189 nt2.59□□□□□ -1.99
LCD1Q04377 SLM1YIL105C 2061 nt2.59□□□□□ -2
LCD1Q04377 MUK1YPL070W 1839 nt2.58□□□□□ -2
LCD1Q04377 SWA2YDR320C 2007 nt2.58□□□□□ -2
LCD1Q04377 SSD1YDR293C 3753 nt2.58□□□□□ -2
LCD1Q04377 GPG1YGL121C 381 nt2.58□□□□□ -2
LCD1Q04377 YJL197C-AYJL197C-A 282 nt2.58□□□□□ -2
LCD1Q04377 INP2YMR163C 2118 nt2.58□□□□□ -2
LCD1Q04377 CSE2YNR010W 450 nt2.58□□□□□ -2
LCD1Q04377 PLC1YPL268W 2610 nt2.58□□□□□ -2
LCD1Q04377 NUP170YBL079W 4509 nt2.58□□□□□ -2
LCD1Q04377 FAR11YNL127W 2862 nt2.57□□□□□ -2
LCD1Q04377 SIR3YLR442C 2937 nt2.57□□□□□ -2
LCD1Q04377 YGL052WYGL052W 306 nt2.57□□□□□ -2
LCD1Q04377 ZRG8YER033C 3231 nt2.57□□□□□ -2
LCD1Q04377 ATG11YPR049C 3537 nt2.56□□□□□ -2
LCD1Q04377 APL5YPL195W 2799 nt2.56□□□□□ -2
LCD1Q04377 SSS1YDR086C 243 nt2.56□□□□□ -2
LCD1Q04377 PAU2YEL049W 363 nt2.56□□□□□ -2
LCD1Q04377 YLR120W-AYLR120W-A 102 nt2.56□□□□□ -2
LCD1Q04377 YCR043CYCR043C 384 nt2.55□□□□□ -2
LCD1Q04377 SWI5YDR146C 2130 nt2.55□□□□□ -2
LCD1Q04377 SMC6YLR383W 3345 nt2.55□□□□□ -2
LCD1Q04377 VIK1YPL253C 1944 nt2.55□□□□□ -2
LCD1Q04377 YFR016CYFR016C 3702 nt2.54□□□□□ -2
LCD1Q04377 PHO2YDL106C 1680 nt2.54□□□□□ -2
LCD1Q04377 ISD11YER048W-A 285 nt2.54□□□□□ -2
LCD1Q04377 YJL135WYJL135W 318 nt2.54□□□□□ -2
LCD1Q04377 YOR015WYOR015W 360 nt2.54□□□□□ -2
LCD1Q04377 RFX1YLR176C 2436 nt2.54□□□□□ -2
LCD1Q04377 UFD4YKL010C 4452 nt2.54□□□□□ -2
LCD1Q04377 TRS130YMR218C 3309 nt2.53□□□□□ -2
LCD1Q04377 INA22YIR024C 651 nt2.53□□□□□ -2
LCD1Q04377 PFD1YJL179W 330 nt2.53□□□□□ -2
LCD1Q04377 RPS29AYLR388W 171 nt2.53□□□□□ -2
LCD1Q04377 YMR321CYMR321C 318 nt2.53□□□□□ -2
LCD1Q04377 DGR1YNL130C-A 147 nt2.53□□□□□ -2
LCD1Q04377 YOR302WYOR302W 78 nt2.53□□□□□ -2
LCD1Q04377 CLN3YAL040C 1743 nt2.53□□□□□ -2
LCD1Q04377 KRE33YNL132W 3171 nt2.53□□□□□ -2.01
LCD1Q04377 tF(GAA)QtF(GAA)Q 75 nt2.52□□□□□ -2.01
LCD1Q04377 SPT21YMR179W 2277 nt2.52□□□□□ -2.01
LCD1Q04377 SLY1YDR189W 2001 nt2.51□□□□□ -2.01
LCD1Q04377 NUP100YKL068W 2880 nt2.51□□□□□ -2.01
LCD1Q04377 YHR073W-AYHR073W-A 177 nt2.51□□□□□ -2.01
LCD1Q04377 YJL052C-AYJL052C-A 120 nt2.51□□□□□ -2.01
LCD1Q04377 YJL182CYJL182C 318 nt2.51□□□□□ -2.01
LCD1Q04377 ATP7YKL016C 525 nt2.51□□□□□ -2.01
LCD1Q04377 PAU8YAL068C 363 nt2.51□□□□□ -2.01
LCD1Q04377 PAU18YLL064C 363 nt2.51□□□□□ -2.01
LCD1Q04377 PAU6YNR076W 363 nt2.51□□□□□ -2.01
LCD1Q04377 PAU20YOL161C 363 nt2.51□□□□□ -2.01
LCD1Q04377 RPB10YOR210W 213 nt2.51□□□□□ -2.01
LCD1Q04377 UBP2YOR124C 3819 nt2.51□□□□□ -2.01
LCD1Q04377 MET18YIL128W 3099 nt2.5□□□□□ -2.01
LCD1Q04377 UBR1YGR184C 5853 nt2.5□□□□□ -2.01
LCD1Q04377 LYS14YDR034C 2373 nt2.5□□□□□ -2.01
LCD1Q04377 MNE1YOR350C 1992 nt2.5□□□□□ -2.01
LCD1Q04377 PDE2YOR360C 1581 nt2.49□□□□□ -2.01
LCD1Q04377 snR72snR72 98 nt2.49□□□□□ -2.01
LCD1Q04377 EMP24YGL200C 612 nt2.49□□□□□ -2.01
LCD1Q04377 YOR011W-AYOR011W-A 207 nt2.49□□□□□ -2.01
LCD1Q04377 PUT3YKL015W 2940 nt2.49□□□□□ -2.01
LCD1Q04377 SPP41YDR464W 4308 nt2.49□□□□□ -2.01
LCD1Q04377 NOP14YDL148C 2433 nt2.48□□□□□ -2.01
LCD1Q04377 TOF1YNL273W 3717 nt2.48□□□□□ -2.01
LCD1Q04377 YLR466C-BYLR466C-B 117 nt2.48□□□□□ -2.01
LCD1Q04377 SEC16YPL085W 6588 nt2.47□□□□□ -2.01
LCD1Q04377 YDL185C-AYDL185C-A 228 nt2.47□□□□□ -2.01
LCD1Q04377 YLR154W-AYLR154W-A 186 nt2.47□□□□□ -2.01
LCD1Q04377 YHR071C-AYHR071C-A 321 nt2.46□□□□□ -2.02
LCD1Q04377 YCL046WYCL046W 324 nt2.46□□□□□ -2.02
LCD1Q04377 VPS54YDR027C 2670 nt2.46□□□□□ -2.02
LCD1Q04377 MPT5YGL178W 2580 nt2.46□□□□□ -2.02
LCD1Q04377 VPS8YAL002W 3825 nt2.45□□□□□ -2.02
LCD1Q04377 RPS17AYML024W 411 nt2.45□□□□□ -2.02
LCD1Q04377 INO80YGL150C 4470 nt2.45□□□□□ -2.02
LCD1Q04377 SAP190YKR028W 3102 nt2.44□□□□□ -2.02
LCD1Q04377 BRE1YDL074C 2103 nt2.44□□□□□ -2.02
LCD1Q04377 AI5_ALPHAQ0070 1893 nt2.44□□□□□ -2.02
LCD1Q04377 YGR151CYGR151C 336 nt2.44□□□□□ -2.02
LCD1Q04377 YKL165C-AYKL165C-A 234 nt2.44□□□□□ -2.02
LCD1Q04377 NIP100YPL174C 2607 nt2.44□□□□□ -2.02
LCD1Q04377 MRP10YDL045W-A 288 nt2.43□□□□□ -2.02
LCD1Q04377 VPS55YJR044C 423 nt2.43□□□□□ -2.02
LCD1Q04377 RRT15YLR162W-A 189 nt2.43□□□□□ -2.02
LCD1Q04377 IRA2YOL081W 9240 nt2.43□□□□□ -2.02
Retrieved 100 of 7,029 protein–RNA pairs in 35.2 ms