Protein–RNA interactions for Protein: P61077

UBE2D3, Ubiquitin-conjugating enzyme E2 D3, humanhuman

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3P61077 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
UBE2D3P61077 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
UBE2D3P61077 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
UBE2D3P61077 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
UBE2D3P61077 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
UBE2D3P61077 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
UBE2D3P61077 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
UBE2D3P61077 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
UBE2D3P61077 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC14.32□□□□□ -0.12
UBE2D3P61077 AC004854.2-201ENST00000608450 1441 ntBASIC14.32□□□□□ -0.12
UBE2D3P61077 RBM17P2-201ENST00000616397 1405 ntBASIC14.32□□□□□ -0.12
UBE2D3P61077 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
UBE2D3P61077 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
UBE2D3P61077 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC14.31□□□□□ -0.12
UBE2D3P61077 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
UBE2D3P61077 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
UBE2D3P61077 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
UBE2D3P61077 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
UBE2D3P61077 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
UBE2D3P61077 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
UBE2D3P61077 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
UBE2D3P61077 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
UBE2D3P61077 AC099778.1-201ENST00000568593 1911 ntBASIC14.31□□□□□ -0.12
UBE2D3P61077 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC14.31□□□□□ -0.12
UBE2D3P61077 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC14.31□□□□□ -0.12
UBE2D3P61077 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
UBE2D3P61077 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
UBE2D3P61077 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
UBE2D3P61077 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
UBE2D3P61077 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC14.31□□□□□ -0.12
UBE2D3P61077 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
UBE2D3P61077 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
UBE2D3P61077 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC14.31□□□□□ -0.12
UBE2D3P61077 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC14.31□□□□□ -0.12
UBE2D3P61077 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC14.31□□□□□ -0.12
UBE2D3P61077 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
UBE2D3P61077 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
UBE2D3P61077 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
UBE2D3P61077 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC14.31□□□□□ -0.12
UBE2D3P61077 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
UBE2D3P61077 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
UBE2D3P61077 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
UBE2D3P61077 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC14.31□□□□□ -0.12
UBE2D3P61077 PCDHAC2-203ENST00000615316 3011 ntBASIC14.31□□□□□ -0.12
UBE2D3P61077 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
UBE2D3P61077 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC14.3□□□□□ -0.12
UBE2D3P61077 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
UBE2D3P61077 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
UBE2D3P61077 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
UBE2D3P61077 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
UBE2D3P61077 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC14.3□□□□□ -0.12
UBE2D3P61077 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
UBE2D3P61077 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
UBE2D3P61077 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
UBE2D3P61077 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC14.3□□□□□ -0.12
UBE2D3P61077 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
UBE2D3P61077 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC14.3□□□□□ -0.12
UBE2D3P61077 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
UBE2D3P61077 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC14.3□□□□□ -0.12
UBE2D3P61077 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
UBE2D3P61077 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
UBE2D3P61077 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
UBE2D3P61077 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
UBE2D3P61077 AC091799.1-201ENST00000422823 811 ntBASIC14.3□□□□□ -0.12
UBE2D3P61077 AC007322.3-201ENST00000426526 701 ntBASIC14.3□□□□□ -0.12
UBE2D3P61077 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC14.3□□□□□ -0.12
UBE2D3P61077 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC14.3□□□□□ -0.12
UBE2D3P61077 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC14.3□□□□□ -0.12
UBE2D3P61077 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
UBE2D3P61077 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
UBE2D3P61077 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC14.3□□□□□ -0.12
UBE2D3P61077 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC14.3□□□□□ -0.12
UBE2D3P61077 BID-204ENST00000399767 2129 ntTSL 2 BASIC14.3□□□□□ -0.12
UBE2D3P61077 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC14.3□□□□□ -0.12
UBE2D3P61077 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
UBE2D3P61077 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
UBE2D3P61077 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
UBE2D3P61077 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
UBE2D3P61077 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
UBE2D3P61077 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC14.29□□□□□ -0.12
UBE2D3P61077 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
UBE2D3P61077 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC14.29□□□□□ -0.12
UBE2D3P61077 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC14.29□□□□□ -0.12
UBE2D3P61077 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
UBE2D3P61077 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC14.29□□□□□ -0.12
UBE2D3P61077 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
UBE2D3P61077 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC14.29□□□□□ -0.12
UBE2D3P61077 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
UBE2D3P61077 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
UBE2D3P61077 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
UBE2D3P61077 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
UBE2D3P61077 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC14.29□□□□□ -0.12
UBE2D3P61077 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
UBE2D3P61077 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
UBE2D3P61077 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
UBE2D3P61077 KRT19P1-201ENST00000405746 1186 ntBASIC14.29□□□□□ -0.12
UBE2D3P61077 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC14.29□□□□□ -0.12
UBE2D3P61077 CD44-222ENST00000526025 1052 ntTSL 2 BASIC14.29□□□□□ -0.12
UBE2D3P61077 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC14.29□□□□□ -0.12
UBE2D3P61077 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms