Protein–RNA interactions for Protein: P61073

CXCR4, C-X-C chemokine receptor type 4, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4P61073 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
CXCR4P61073 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CXCR4P61073 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC18.36■□□□□ 0.53
CXCR4P61073 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CXCR4P61073 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC18.36■□□□□ 0.53
CXCR4P61073 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
CXCR4P61073 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
CXCR4P61073 MFF-208ENST00000409616 1247 ntTSL 5 BASIC18.36■□□□□ 0.53
CXCR4P61073 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CXCR4P61073 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC18.36■□□□□ 0.53
CXCR4P61073 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC18.36■□□□□ 0.53
CXCR4P61073 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CXCR4P61073 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CXCR4P61073 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC18.36■□□□□ 0.53
CXCR4P61073 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
CXCR4P61073 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC18.36■□□□□ 0.53
CXCR4P61073 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC18.36■□□□□ 0.53
CXCR4P61073 LETM1P2-201ENST00000597330 2178 ntBASIC18.36■□□□□ 0.53
CXCR4P61073 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CXCR4P61073 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CXCR4P61073 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC18.35■□□□□ 0.53
CXCR4P61073 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CXCR4P61073 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CXCR4P61073 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC18.35■□□□□ 0.53
CXCR4P61073 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CXCR4P61073 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CXCR4P61073 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC18.35■□□□□ 0.53
CXCR4P61073 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC18.35■□□□□ 0.53
CXCR4P61073 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC18.35■□□□□ 0.53
CXCR4P61073 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
CXCR4P61073 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
CXCR4P61073 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
CXCR4P61073 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CXCR4P61073 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC18.35■□□□□ 0.53
CXCR4P61073 AC027682.1-201ENST00000562846 899 ntBASIC18.35■□□□□ 0.53
CXCR4P61073 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC18.35■□□□□ 0.53
CXCR4P61073 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CXCR4P61073 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
CXCR4P61073 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
CXCR4P61073 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
CXCR4P61073 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC18.35■□□□□ 0.53
CXCR4P61073 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
CXCR4P61073 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CXCR4P61073 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CXCR4P61073 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
CXCR4P61073 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
CXCR4P61073 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
CXCR4P61073 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
CXCR4P61073 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC18.34■□□□□ 0.53
CXCR4P61073 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC18.34■□□□□ 0.53
CXCR4P61073 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC18.34■□□□□ 0.53
CXCR4P61073 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
CXCR4P61073 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
CXCR4P61073 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CXCR4P61073 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
CXCR4P61073 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
CXCR4P61073 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CXCR4P61073 NEFHP1-201ENST00000412845 2629 ntBASIC18.34■□□□□ 0.53
CXCR4P61073 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
CXCR4P61073 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC18.33■□□□□ 0.53
CXCR4P61073 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
CXCR4P61073 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC18.33■□□□□ 0.53
CXCR4P61073 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC18.33■□□□□ 0.53
CXCR4P61073 AL138781.2-201ENST00000617896 1843 ntBASIC18.33■□□□□ 0.53
CXCR4P61073 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CXCR4P61073 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CXCR4P61073 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CXCR4P61073 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CXCR4P61073 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC18.33■□□□□ 0.52
CXCR4P61073 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC18.33■□□□□ 0.52
CXCR4P61073 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC18.33■□□□□ 0.52
CXCR4P61073 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC18.33■□□□□ 0.52
CXCR4P61073 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC18.33■□□□□ 0.52
CXCR4P61073 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC18.33■□□□□ 0.52
CXCR4P61073 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CXCR4P61073 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC18.33■□□□□ 0.52
CXCR4P61073 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC18.33■□□□□ 0.52
CXCR4P61073 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC18.33■□□□□ 0.52
CXCR4P61073 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
CXCR4P61073 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CXCR4P61073 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC18.33■□□□□ 0.52
CXCR4P61073 PTGES2-AS1-201ENST00000443493 2100 ntBASIC18.32■□□□□ 0.52
CXCR4P61073 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC18.32■□□□□ 0.52
CXCR4P61073 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
CXCR4P61073 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CXCR4P61073 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC18.32■□□□□ 0.52
CXCR4P61073 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC18.32■□□□□ 0.52
CXCR4P61073 AC026471.1-201ENST00000564629 3026 ntBASIC18.32■□□□□ 0.52
CXCR4P61073 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC18.32■□□□□ 0.52
CXCR4P61073 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC18.32■□□□□ 0.52
CXCR4P61073 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
CXCR4P61073 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC18.32■□□□□ 0.52
CXCR4P61073 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CXCR4P61073 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
CXCR4P61073 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC18.32■□□□□ 0.52
CXCR4P61073 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CXCR4P61073 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
CXCR4P61073 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CXCR4P61073 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CXCR4P61073 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC18.32■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms