Protein–RNA interactions for Protein: P60953

CDC42, Cell division control protein 42 homolog, humanhuman

Predictions only

Length 191 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42P60953 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC18.4■□□□□ 0.54
CDC42P60953 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CDC42P60953 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC18.4■□□□□ 0.54
CDC42P60953 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC18.4■□□□□ 0.54
CDC42P60953 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CDC42P60953 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC18.4■□□□□ 0.54
CDC42P60953 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CDC42P60953 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
CDC42P60953 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC18.4■□□□□ 0.54
CDC42P60953 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.54
CDC42P60953 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
CDC42P60953 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.54
CDC42P60953 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.54
CDC42P60953 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CDC42P60953 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CDC42P60953 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
CDC42P60953 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CDC42P60953 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC18.39■□□□□ 0.53
CDC42P60953 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CDC42P60953 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CDC42P60953 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC18.39■□□□□ 0.53
CDC42P60953 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC18.39■□□□□ 0.53
CDC42P60953 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC18.39■□□□□ 0.53
CDC42P60953 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CDC42P60953 MPST-208ENST00000628507 698 ntTSL 5 BASIC18.39■□□□□ 0.53
CDC42P60953 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC18.39■□□□□ 0.53
CDC42P60953 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC18.39■□□□□ 0.53
CDC42P60953 TSPY26P-201ENST00000476365 1326 ntBASIC18.39■□□□□ 0.53
CDC42P60953 AC116050.2-201ENST00000612102 1779 ntBASIC18.39■□□□□ 0.53
CDC42P60953 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CDC42P60953 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CDC42P60953 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CDC42P60953 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CDC42P60953 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC18.39■□□□□ 0.53
CDC42P60953 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CDC42P60953 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC18.39■□□□□ 0.53
CDC42P60953 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CDC42P60953 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC18.39■□□□□ 0.53
CDC42P60953 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC18.39■□□□□ 0.53
CDC42P60953 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CDC42P60953 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CDC42P60953 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CDC42P60953 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CDC42P60953 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CDC42P60953 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CDC42P60953 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC18.38■□□□□ 0.53
CDC42P60953 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC18.38■□□□□ 0.53
CDC42P60953 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC18.38■□□□□ 0.53
CDC42P60953 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CDC42P60953 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
CDC42P60953 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC18.38■□□□□ 0.53
CDC42P60953 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC18.38■□□□□ 0.53
CDC42P60953 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CDC42P60953 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC18.38■□□□□ 0.53
CDC42P60953 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
CDC42P60953 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CDC42P60953 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CDC42P60953 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CDC42P60953 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC18.38■□□□□ 0.53
CDC42P60953 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC18.38■□□□□ 0.53
CDC42P60953 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
CDC42P60953 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CDC42P60953 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CDC42P60953 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CDC42P60953 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CDC42P60953 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
CDC42P60953 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CDC42P60953 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
CDC42P60953 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC18.37■□□□□ 0.53
CDC42P60953 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CDC42P60953 POLI-202ENST00000406285 2030 ntTSL 2 BASIC18.37■□□□□ 0.53
CDC42P60953 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC18.37■□□□□ 0.53
CDC42P60953 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CDC42P60953 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC18.37■□□□□ 0.53
CDC42P60953 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CDC42P60953 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
CDC42P60953 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CDC42P60953 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
CDC42P60953 UNC93B3-201ENST00000308076 687 ntBASIC18.37■□□□□ 0.53
CDC42P60953 GRAMD4P2-201ENST00000423297 1097 ntBASIC18.37■□□□□ 0.53
CDC42P60953 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC18.37■□□□□ 0.53
CDC42P60953 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CDC42P60953 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC18.37■□□□□ 0.53
CDC42P60953 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CDC42P60953 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
CDC42P60953 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
CDC42P60953 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC18.37■□□□□ 0.53
CDC42P60953 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CDC42P60953 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CDC42P60953 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CDC42P60953 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CDC42P60953 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC18.37■□□□□ 0.53
CDC42P60953 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC18.37■□□□□ 0.53
CDC42P60953 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC18.37■□□□□ 0.53
CDC42P60953 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC18.36■□□□□ 0.53
CDC42P60953 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CDC42P60953 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
CDC42P60953 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CDC42P60953 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
CDC42P60953 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms