Protein–RNA interactions for Protein: P53384

NUBP1, Cytosolic Fe-S cluster assembly factor NUBP1, humanhuman

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUBP1P53384 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
NUBP1P53384 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
NUBP1P53384 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC20.22■□□□□ 0.83
NUBP1P53384 SULT1A1-211ENST00000569554 1578 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
NUBP1P53384 HCG4P8-203ENST00000443049 980 ntBASIC20.22■□□□□ 0.83
NUBP1P53384 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC20.22■□□□□ 0.83
NUBP1P53384 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
NUBP1P53384 CD320-202ENST00000537716 1119 ntTSL 2 BASIC20.22■□□□□ 0.83
NUBP1P53384 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC20.22■□□□□ 0.83
NUBP1P53384 CLEC4GP1-201ENST00000596555 870 ntBASIC20.22■□□□□ 0.83
NUBP1P53384 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC20.22■□□□□ 0.83
NUBP1P53384 AL138966.2-201ENST00000621997 464 ntBASIC20.22■□□□□ 0.83
NUBP1P53384 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
NUBP1P53384 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC20.22■□□□□ 0.83
NUBP1P53384 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
NUBP1P53384 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
NUBP1P53384 NFE2L3P1-201ENST00000588207 1959 ntBASIC20.21■□□□□ 0.83
NUBP1P53384 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC20.21■□□□□ 0.83
NUBP1P53384 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC20.21■□□□□ 0.83
NUBP1P53384 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
NUBP1P53384 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC20.21■□□□□ 0.83
NUBP1P53384 AC137695.1-201ENST00000604126 489 ntBASIC20.21■□□□□ 0.83
NUBP1P53384 AC139887.4-201ENST00000607877 719 ntBASIC20.21■□□□□ 0.83
NUBP1P53384 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC20.21■□□□□ 0.83
NUBP1P53384 AL031432.5-201ENST00000641059 760 ntBASIC20.21■□□□□ 0.83
NUBP1P53384 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
NUBP1P53384 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC20.21■□□□□ 0.83
NUBP1P53384 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
NUBP1P53384 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC20.21■□□□□ 0.83
NUBP1P53384 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC20.21■□□□□ 0.83
NUBP1P53384 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
NUBP1P53384 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
NUBP1P53384 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
NUBP1P53384 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.83
NUBP1P53384 AC092053.2-201ENST00000640557 1818 ntBASIC20.2■□□□□ 0.82
NUBP1P53384 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
NUBP1P53384 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
NUBP1P53384 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC20.2■□□□□ 0.82
NUBP1P53384 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
NUBP1P53384 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
NUBP1P53384 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
NUBP1P53384 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
NUBP1P53384 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
NUBP1P53384 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC20.2■□□□□ 0.82
NUBP1P53384 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
NUBP1P53384 COX11P1-201ENST00000489116 835 ntBASIC20.2■□□□□ 0.82
NUBP1P53384 YBX1P2-201ENST00000489612 999 ntBASIC20.2■□□□□ 0.82
NUBP1P53384 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC20.2■□□□□ 0.82
NUBP1P53384 ADAM3B-201ENST00000569937 840 ntBASIC20.2■□□□□ 0.82
NUBP1P53384 GPALPP1-207ENST00000611650 899 ntBASIC20.2■□□□□ 0.82
NUBP1P53384 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC20.2■□□□□ 0.82
NUBP1P53384 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
NUBP1P53384 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC20.2■□□□□ 0.82
NUBP1P53384 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
NUBP1P53384 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC20.2■□□□□ 0.82
NUBP1P53384 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC20.19■□□□□ 0.82
NUBP1P53384 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
NUBP1P53384 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
NUBP1P53384 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC20.19■□□□□ 0.82
NUBP1P53384 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC20.19■□□□□ 0.82
NUBP1P53384 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
NUBP1P53384 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC20.19■□□□□ 0.82
NUBP1P53384 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC20.19■□□□□ 0.82
NUBP1P53384 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC20.19■□□□□ 0.82
NUBP1P53384 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
NUBP1P53384 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC20.19■□□□□ 0.82
NUBP1P53384 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC20.19■□□□□ 0.82
NUBP1P53384 HOMER2P1-201ENST00000455653 964 ntBASIC20.19■□□□□ 0.82
NUBP1P53384 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC20.19■□□□□ 0.82
NUBP1P53384 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC20.19■□□□□ 0.82
NUBP1P53384 AL161757.2-201ENST00000553800 421 ntTSL 3 BASIC20.19■□□□□ 0.82
NUBP1P53384 ETFRF1-205ENST00000555711 783 ntTSL 3 BASIC20.19■□□□□ 0.82
NUBP1P53384 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
NUBP1P53384 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC20.19■□□□□ 0.82
NUBP1P53384 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC20.19■□□□□ 0.82
NUBP1P53384 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
NUBP1P53384 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
NUBP1P53384 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
NUBP1P53384 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
NUBP1P53384 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC20.18■□□□□ 0.82
NUBP1P53384 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC20.18■□□□□ 0.82
NUBP1P53384 MESTP1-201ENST00000404287 994 ntBASIC20.18■□□□□ 0.82
NUBP1P53384 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
NUBP1P53384 PPP1R14BP5-201ENST00000440334 435 ntBASIC20.18■□□□□ 0.82
NUBP1P53384 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC20.18■□□□□ 0.82
NUBP1P53384 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
NUBP1P53384 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
NUBP1P53384 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC20.18■□□□□ 0.82
NUBP1P53384 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC20.17■□□□□ 0.82
NUBP1P53384 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC20.17■□□□□ 0.82
NUBP1P53384 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
NUBP1P53384 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
NUBP1P53384 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
NUBP1P53384 AL445675.2-201ENST00000620291 557 ntBASIC20.17■□□□□ 0.82
NUBP1P53384 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC20.17■□□□□ 0.82
NUBP1P53384 AC093458.2-201ENST00000623150 629 ntBASIC20.17■□□□□ 0.82
NUBP1P53384 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
NUBP1P53384 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC20.17■□□□□ 0.82
NUBP1P53384 MGA-212ENST00000619521 1496 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
NUBP1P53384 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms