Protein–RNA interactions for Protein: P52435

POLR2J, DNA-directed RNA polymerase II subunit RPB11-a, humanhuman

Known RBP Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2JP52435 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC19.27■□□□□ 0.68
POLR2JP52435 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
POLR2JP52435 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
POLR2JP52435 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
POLR2JP52435 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
POLR2JP52435 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC19.27■□□□□ 0.68
POLR2JP52435 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
POLR2JP52435 AC105265.2-201ENST00000467189 838 ntBASIC19.27■□□□□ 0.68
POLR2JP52435 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC19.27■□□□□ 0.68
POLR2JP52435 FAM21FP-204ENST00000608637 956 ntBASIC19.27■□□□□ 0.68
POLR2JP52435 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
POLR2JP52435 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.67
POLR2JP52435 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
POLR2JP52435 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
POLR2JP52435 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
POLR2JP52435 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC19.27■□□□□ 0.67
POLR2JP52435 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
POLR2JP52435 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC19.27■□□□□ 0.67
POLR2JP52435 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
POLR2JP52435 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
POLR2JP52435 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
POLR2JP52435 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
POLR2JP52435 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC19.26■□□□□ 0.67
POLR2JP52435 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
POLR2JP52435 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
POLR2JP52435 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
POLR2JP52435 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC19.26■□□□□ 0.67
POLR2JP52435 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC19.26■□□□□ 0.67
POLR2JP52435 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
POLR2JP52435 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC19.26■□□□□ 0.67
POLR2JP52435 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
POLR2JP52435 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
POLR2JP52435 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
POLR2JP52435 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC19.26■□□□□ 0.67
POLR2JP52435 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
POLR2JP52435 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC19.26■□□□□ 0.67
POLR2JP52435 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
POLR2JP52435 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
POLR2JP52435 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
POLR2JP52435 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
POLR2JP52435 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
POLR2JP52435 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
POLR2JP52435 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
POLR2JP52435 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
POLR2JP52435 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC19.25■□□□□ 0.67
POLR2JP52435 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC19.25■□□□□ 0.67
POLR2JP52435 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
POLR2JP52435 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
POLR2JP52435 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
POLR2JP52435 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
POLR2JP52435 TESC-206ENST00000541210 936 ntTSL 3 BASIC19.25■□□□□ 0.67
POLR2JP52435 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC19.25■□□□□ 0.67
POLR2JP52435 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC19.25■□□□□ 0.67
POLR2JP52435 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC19.25■□□□□ 0.67
POLR2JP52435 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
POLR2JP52435 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC19.25■□□□□ 0.67
POLR2JP52435 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC19.25■□□□□ 0.67
POLR2JP52435 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC19.25■□□□□ 0.67
POLR2JP52435 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
POLR2JP52435 AC018445.3-201ENST00000624177 1945 ntBASIC19.25■□□□□ 0.67
POLR2JP52435 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
POLR2JP52435 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
POLR2JP52435 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC19.25■□□□□ 0.67
POLR2JP52435 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC19.24■□□□□ 0.67
POLR2JP52435 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
POLR2JP52435 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
POLR2JP52435 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
POLR2JP52435 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
POLR2JP52435 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
POLR2JP52435 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC19.24■□□□□ 0.67
POLR2JP52435 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC19.24■□□□□ 0.67
POLR2JP52435 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC19.24■□□□□ 0.67
POLR2JP52435 SLC7A5P1-201ENST00000568957 537 ntBASIC19.24■□□□□ 0.67
POLR2JP52435 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
POLR2JP52435 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC19.24■□□□□ 0.67
POLR2JP52435 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
POLR2JP52435 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
POLR2JP52435 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
POLR2JP52435 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
POLR2JP52435 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
POLR2JP52435 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC19.23■□□□□ 0.67
POLR2JP52435 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
POLR2JP52435 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
POLR2JP52435 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
POLR2JP52435 AK1-201ENST00000223836 736 ntTSL 3 BASIC19.23■□□□□ 0.67
POLR2JP52435 SAPCD2P1-201ENST00000395413 1184 ntBASIC19.23■□□□□ 0.67
POLR2JP52435 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC19.23■□□□□ 0.67
POLR2JP52435 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC19.23■□□□□ 0.67
POLR2JP52435 CD44-222ENST00000526025 1052 ntTSL 2 BASIC19.23■□□□□ 0.67
POLR2JP52435 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC19.23■□□□□ 0.67
POLR2JP52435 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
POLR2JP52435 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
POLR2JP52435 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC19.23■□□□□ 0.67
POLR2JP52435 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
POLR2JP52435 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
POLR2JP52435 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
POLR2JP52435 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
POLR2JP52435 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
POLR2JP52435 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
POLR2JP52435 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 16.2 ms