Protein–RNA interactions for Protein: P51956

NEK3, Serine/threonine-protein kinase Nek3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3P51956 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC20.76■□□□□ 0.91
NEK3P51956 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC20.76■□□□□ 0.91
NEK3P51956 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC20.76■□□□□ 0.91
NEK3P51956 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
NEK3P51956 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
NEK3P51956 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
NEK3P51956 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
NEK3P51956 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
NEK3P51956 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
NEK3P51956 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
NEK3P51956 VMO1-204ENST00000441199 741 ntTSL 2 BASIC20.76■□□□□ 0.91
NEK3P51956 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC20.76■□□□□ 0.91
NEK3P51956 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC20.76■□□□□ 0.91
NEK3P51956 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
NEK3P51956 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
NEK3P51956 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
NEK3P51956 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
NEK3P51956 AC116050.2-201ENST00000612102 1779 ntBASIC20.76■□□□□ 0.91
NEK3P51956 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
NEK3P51956 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
NEK3P51956 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC20.76■□□□□ 0.91
NEK3P51956 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
NEK3P51956 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC20.75■□□□□ 0.91
NEK3P51956 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC20.75■□□□□ 0.91
NEK3P51956 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
NEK3P51956 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
NEK3P51956 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
NEK3P51956 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
NEK3P51956 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC20.75■□□□□ 0.91
NEK3P51956 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC20.75■□□□□ 0.91
NEK3P51956 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC20.75■□□□□ 0.91
NEK3P51956 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
NEK3P51956 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC20.75■□□□□ 0.91
NEK3P51956 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC20.75■□□□□ 0.91
NEK3P51956 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC20.75■□□□□ 0.91
NEK3P51956 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
NEK3P51956 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC20.75■□□□□ 0.91
NEK3P51956 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
NEK3P51956 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
NEK3P51956 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
NEK3P51956 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
NEK3P51956 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
NEK3P51956 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
NEK3P51956 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
NEK3P51956 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
NEK3P51956 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
NEK3P51956 MCRIP2P1-201ENST00000394346 511 ntBASIC20.74■□□□□ 0.91
NEK3P51956 BID-203ENST00000399765 1879 ntTSL 2 BASIC20.74■□□□□ 0.91
NEK3P51956 LSM12P1-201ENST00000411836 588 ntBASIC20.74■□□□□ 0.91
NEK3P51956 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
NEK3P51956 SERPINH1P1-201ENST00000419794 1249 ntBASIC20.74■□□□□ 0.91
NEK3P51956 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC20.74■□□□□ 0.91
NEK3P51956 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
NEK3P51956 CYP2T3P-201ENST00000601990 817 ntBASIC20.74■□□□□ 0.91
NEK3P51956 AL162377.1-201ENST00000618844 1793 ntBASIC20.74■□□□□ 0.91
NEK3P51956 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
NEK3P51956 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
NEK3P51956 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
NEK3P51956 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
NEK3P51956 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
NEK3P51956 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
NEK3P51956 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC20.73■□□□□ 0.91
NEK3P51956 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
NEK3P51956 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC20.73■□□□□ 0.91
NEK3P51956 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
NEK3P51956 AL355472.2-201ENST00000422958 438 ntBASIC20.73■□□□□ 0.91
NEK3P51956 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC20.73■□□□□ 0.91
NEK3P51956 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
NEK3P51956 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC20.73■□□□□ 0.91
NEK3P51956 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC20.73■□□□□ 0.91
NEK3P51956 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
NEK3P51956 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
NEK3P51956 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
NEK3P51956 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
NEK3P51956 DET1-207ENST00000564406 2315 ntTSL 2 BASIC20.73■□□□□ 0.91
NEK3P51956 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC20.73■□□□□ 0.91
NEK3P51956 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
NEK3P51956 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
NEK3P51956 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
NEK3P51956 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
NEK3P51956 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC20.73■□□□□ 0.91
NEK3P51956 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
NEK3P51956 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
NEK3P51956 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
NEK3P51956 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
NEK3P51956 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC20.72■□□□□ 0.91
NEK3P51956 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
NEK3P51956 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC20.72■□□□□ 0.91
NEK3P51956 DUSP5P2-201ENST00000426873 1033 ntBASIC20.72■□□□□ 0.91
NEK3P51956 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC20.72■□□□□ 0.91
NEK3P51956 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC20.72■□□□□ 0.91
NEK3P51956 RHEB-204ENST00000472642 900 ntTSL 3 BASIC20.72■□□□□ 0.91
NEK3P51956 AC097658.1-201ENST00000475555 843 ntBASIC20.72■□□□□ 0.91
NEK3P51956 AC091874.3-201ENST00000512672 1195 ntBASIC20.72■□□□□ 0.91
NEK3P51956 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
NEK3P51956 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC20.72■□□□□ 0.91
NEK3P51956 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC20.72■□□□□ 0.91
NEK3P51956 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC20.72■□□□□ 0.91
NEK3P51956 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
NEK3P51956 PCDHAC2-203ENST00000615316 3011 ntBASIC20.72■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms