Protein–RNA interactions for Protein: P50875

SPT20, Transcription factor SPT20, yeastyeast

Predictions only

Length 604 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SPT20P50875 YPL257W-BYPL257W-B 5268 nt2.57□□□□□ -2
SPT20P50875 YPR158W-BYPR158W-B 5271 nt2.57□□□□□ -2
SPT20P50875 YPR089WYPR089W 2667 nt2.57□□□□□ -2
SPT20P50875 PRP6YBR055C 2700 nt2.57□□□□□ -2
SPT20P50875 DNL4YOR005C 2835 nt2.57□□□□□ -2
SPT20P50875 HAL9YOL089C 3093 nt2.57□□□□□ -2
SPT20P50875 RPS17AYML024W 411 nt2.57□□□□□ -2
SPT20P50875 RPB10YOR210W 213 nt2.57□□□□□ -2
SPT20P50875 YOR314W-AYOR314W-A 111 nt2.57□□□□□ -2
SPT20P50875 IRR1YIL026C 3453 nt2.56□□□□□ -2
SPT20P50875 ATG11YPR049C 3537 nt2.56□□□□□ -2
SPT20P50875 SMY1YKL079W 1971 nt2.56□□□□□ -2
SPT20P50875 JSN1YJR091C 3276 nt2.56□□□□□ -2
SPT20P50875 YGR050CYGR050C 357 nt2.56□□□□□ -2
SPT20P50875 ACM1YPL267W 630 nt2.56□□□□□ -2
SPT20P50875 YPR203WYPR203W 309 nt2.56□□□□□ -2
SPT20P50875 RGA2YDR379W 3030 nt2.56□□□□□ -2
SPT20P50875 YDR209CYDR209C 414 nt2.55□□□□□ -2
SPT20P50875 YIL174WYIL174W 228 nt2.55□□□□□ -2
SPT20P50875 YJL022WYJL022W 309 nt2.55□□□□□ -2
SPT20P50875 YJL222W-AYJL222W-A 228 nt2.55□□□□□ -2
SPT20P50875 RFX1YLR176C 2436 nt2.55□□□□□ -2
SPT20P50875 NAB6YML117W 3405 nt2.55□□□□□ -2
SPT20P50875 SIR3YLR442C 2937 nt2.55□□□□□ -2
SPT20P50875 FMP16YDR070C 282 nt2.54□□□□□ -2
SPT20P50875 YBR221W-AYBR221W-A 105 nt2.54□□□□□ -2
SPT20P50875 SWI6YLR182W 2412 nt2.54□□□□□ -2
SPT20P50875 YPL216WYPL216W 3309 nt2.54□□□□□ -2
SPT20P50875 SPO22YIL073C 2928 nt2.53□□□□□ -2
SPT20P50875 STB4YMR019W 2850 nt2.53□□□□□ -2
SPT20P50875 HYP2YEL034W 474 nt2.53□□□□□ -2
SPT20P50875 TCB2YNL087W 3537 nt2.53□□□□□ -2
SPT20P50875 IKI3YLR384C 4050 nt2.52□□□□□ -2.01
SPT20P50875 MMS1YPR164W 4224 nt2.52□□□□□ -2.01
SPT20P50875 NFT1YKR103W 3657 nt2.52□□□□□ -2.01
SPT20P50875 RRP12YPL012W 3687 nt2.52□□□□□ -2.01
SPT20P50875 RIC1YLR039C 3171 nt2.52□□□□□ -2.01
SPT20P50875 YJL120WYJL120W 324 nt2.52□□□□□ -2.01
SPT20P50875 YBL012CYBL012C 402 nt2.52□□□□□ -2.01
SPT20P50875 YNL103W-AYNL103W-A 90 nt2.52□□□□□ -2.01
SPT20P50875 YOR102WYOR102W 351 nt2.52□□□□□ -2.01
SPT20P50875 PTP3YER075C 2787 nt2.52□□□□□ -2.01
SPT20P50875 ESC1YMR219W 4977 nt2.52□□□□□ -2.01
SPT20P50875 GIS1YDR096W 2685 nt2.52□□□□□ -2.01
SPT20P50875 SUL1YBR294W 2580 nt2.52□□□□□ -2.01
SPT20P50875 ELG1YOR144C 2376 nt2.51□□□□□ -2.01
SPT20P50875 YDL196WYDL196W 330 nt2.51□□□□□ -2.01
SPT20P50875 RPL42BYHR141C 321 nt2.51□□□□□ -2.01
SPT20P50875 RPL42AYNL162W 321 nt2.51□□□□□ -2.01
SPT20P50875 YDR341CYDR341C 1824 nt2.51□□□□□ -2.01
SPT20P50875 GEA1YJR031C 4227 nt2.5□□□□□ -2.01
SPT20P50875 UTP14YML093W 2700 nt2.5□□□□□ -2.01
SPT20P50875 YKU80YMR106C 1890 nt2.5□□□□□ -2.01
SPT20P50875 SLY1YDR189W 2001 nt2.5□□□□□ -2.01
SPT20P50875 SCH9YHR205W 2475 nt2.5□□□□□ -2.01
SPT20P50875 AXL1YPR122W 3627 nt2.5□□□□□ -2.01
SPT20P50875 NCA2YPR155C 1851 nt2.5□□□□□ -2.01
SPT20P50875 snR70snR70 164 nt2.49□□□□□ -2.01
SPT20P50875 PMP2YEL017C-A 132 nt2.49□□□□□ -2.01
SPT20P50875 YHL015W-AYHL015W-A 84 nt2.49□□□□□ -2.01
SPT20P50875 APL5YPL195W 2799 nt2.49□□□□□ -2.01
SPT20P50875 SNF5YBR289W 2718 nt2.48□□□□□ -2.01
SPT20P50875 PUT3YKL015W 2940 nt2.48□□□□□ -2.01
SPT20P50875 SRP14YDL092W 441 nt2.48□□□□□ -2.01
SPT20P50875 YER053C-AYER053C-A 114 nt2.48□□□□□ -2.01
SPT20P50875 YHR071C-AYHR071C-A 321 nt2.48□□□□□ -2.01
SPT20P50875 YHR073W-AYHR073W-A 177 nt2.48□□□□□ -2.01
SPT20P50875 RPS25BYLR333C 327 nt2.48□□□□□ -2.01
SPT20P50875 BUB1YGR188C 3066 nt2.48□□□□□ -2.01
SPT20P50875 MNE1YOR350C 1992 nt2.48□□□□□ -2.01
SPT20P50875 SRO77YBL106C 3033 nt2.48□□□□□ -2.01
SPT20P50875 DNA2YHR164C 4569 nt2.48□□□□□ -2.01
SPT20P50875 TAE2YPL009C 3117 nt2.48□□□□□ -2.01
SPT20P50875 MSC6YOR354C 2079 nt2.48□□□□□ -2.01
SPT20P50875 BNR1YIL159W 4128 nt2.48□□□□□ -2.01
SPT20P50875 YPL150WYPL150W 2706 nt2.48□□□□□ -2.01
SPT20P50875 KAP123YER110C 3342 nt2.47□□□□□ -2.01
SPT20P50875 YLL019W-AYLL019W-A 93 nt2.47□□□□□ -2.01
SPT20P50875 RTT10YPL183C 3042 nt2.47□□□□□ -2.01
SPT20P50875 LYS14YDR034C 2373 nt2.47□□□□□ -2.01
SPT20P50875 DUG2YBR281C 2637 nt2.46□□□□□ -2.02
SPT20P50875 NUM1YDR150W 8247 nt2.46□□□□□ -2.02
SPT20P50875 BCK1YJL095W 4437 nt2.46□□□□□ -2.02
SPT20P50875 SWI5YDR146C 2130 nt2.46□□□□□ -2.02
SPT20P50875 SBH1YER087C-B 249 nt2.46□□□□□ -2.02
SPT20P50875 tW(CCA)G1tW(CCA)G1 72 nt2.46□□□□□ -2.02
SPT20P50875 tW(CCA)G2tW(CCA)G2 72 nt2.46□□□□□ -2.02
SPT20P50875 tW(CCA)JtW(CCA)J 72 nt2.46□□□□□ -2.02
SPT20P50875 tW(CCA)KtW(CCA)K 72 nt2.46□□□□□ -2.02
SPT20P50875 tW(CCA)MtW(CCA)M 72 nt2.46□□□□□ -2.02
SPT20P50875 tW(CCA)PtW(CCA)P 72 nt2.46□□□□□ -2.02
SPT20P50875 MMS22YLR320W 4365 nt2.46□□□□□ -2.02
SPT20P50875 FKS3YMR306W 5358 nt2.45□□□□□ -2.02
SPT20P50875 CRM1YGR218W 3255 nt2.45□□□□□ -2.02
SPT20P50875 SSN2YDR443C 4263 nt2.45□□□□□ -2.02
SPT20P50875 YCR043CYCR043C 384 nt2.45□□□□□ -2.02
SPT20P50875 PAU3YCR104W 375 nt2.45□□□□□ -2.02
SPT20P50875 ZRG17YNR039C 1818 nt2.45□□□□□ -2.02
SPT20P50875 SDC25YLL016W 3147 nt2.44□□□□□ -2.02
SPT20P50875 FIG4YNL325C 2640 nt2.44□□□□□ -2.02
Retrieved 100 of 7,029 protein–RNA pairs in 18.9 ms